Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11429.1-v1.0-hybrid |
Family | GT4 |
Protein Properties | Length: 1526 Molecular Weight: 174486 Isoelectric Point: 5.5344 |
Chromosome | Chromosome/Scaffold: 1 Start: 4790008 End: 4802072 |
Description | sucrose synthase 4 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 557 | 724 | 0 |
LNDKNKPIIFTMARLDRVKNITGLVEWYGKNAKLRELVNLVVVAGDRRKESKDNEEKAEMKKMYELIDTYKLNGQFRWISSQMNRVRNGELYRYIADTKG AFVQPAVYEAFGLTVVEAMTCGLPTFATCKGGPAEIIVNGKSGYHIDPYNGDKAADILVDFFEKCKAD |
Full Sequence |
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Protein Sequence Length: 1526 Download |
MADPSSCAHC SIYERLDWTM SDHRVEILAV LSKLESNGKG FVQPQQLVAV FQAIPEAFGE 60 VSKNIQEALV LSPYLALAIR PRPGVWEHIR INMKTLDVEE LLVDEYLMMK EELVDGSAKG 120 DFVLELDFEP FNASVPKPIL SKSIGNGVEF LNRHISAKLF TEPESMQPEL LEFLRIHTHD 180 GKNLMLNDNI EDVESLQHVL MEVEEYLLTL SPETAYEAFE QKLQDLGLER GWGSNAGRVL 240 ETIQLLLELL EAPDACNLEK FLSKIPLVFN VVIMSPHGYF AQDNVLGYPD TGGQVVYILD 300 QVRALENEML KRIKEQGLDI TPRILIVTRL LPDAVGTTCG QRLEKVYGTQ YSDIIRVPFR 360 TEKGIVRRWI SRFEVWPYLE AYTEDVATEL LKEFQGKPDL IVGNYSDGNI VASLLAHKFD 420 VTQCTIAHAL EKTKYPDSDL YWKKLEDKYH FSCQFTADLI AMNQTDFIIT STFQEIAGNK 480 ETVGQYESHL AFTMPGLYRV VSGIDCFDPK FNIVSPGADM DIYFPYTEKE RRLTSFHSEI 540 EELLYNQVEN KEHLCVLNDK NKPIIFTMAR LDRVKNITGL VEWYGKNAKL RELVNLVVVA 600 GDRRKESKDN EEKAEMKKMY ELIDTYKLNG QFRWISSQMN RVRNGELYRY IADTKGAFVQ 660 PAVYEAFGLT VVEAMTCGLP TFATCKGGPA EIIVNGKSGY HIDPYNGDKA ADILVDFFEK 720 CKADPSHWDK ISQGGLKRIE EKYTWQIYSE RLLTLTGVYG FWKQVSDLDE KRRYIEMLYA 780 LRYKKSVESV PLAEEDFRIE IGVSLTLSLS PVMKDSNLVY NRRQSETKEE RKPMDSLSVF 840 THSEIMKLEN IFKETPQQAL TQGFFQNLAI DFSCQPSRLG KSDITQQQVE GWFQSRRKEI 900 QAKGTTSSGA FDWVVESHED LSDLTMFSNE PDNSQKDPCI TDLSELAFEA KSSKDGAWYD 960 VASFLTYRVV SSGELEVRVR YAGFGREEDE WVNVRRAVRD RSIPLEESEC HKVKVGDLVL 1020 CFQEREDEAV YFDALVVEIQ RNLHDQTGCR CIFVVRFDHD KSKLPTSELR SRKKMASYMW 1080 RKYADYVYTK WERMILWNMV EPYTRPKSFT PLVTIYVAAF YTGVVASAIT EQLYKEKYWE 1140 DHPGHQVPLM KPKFYGGPWK TMTTYGTIPT EPLPSANVAI VSQAKEQIEL CLGIQRPWLE 1200 MIQLQNLRPP SSLNQSIERI RTNVAFFRMN YTIIILAILF ISLLWHPISL LLMIVLMAAW 1260 LSLYYLHDKP LMVLDHDIDH RFLMTALFLV TALVLFLTNV KYNIIRALSF GLAFVLVHGA 1320 LREPEDVFVV DDEEGSGGGS ETERNGNMYQ VKRYGGLGYG FPSLAVFRTP STPPSHIHAP 1380 LSFCQRKSIM SRSAQGWSWF RSKAKRFTPV SHQGSVWSGV KSPPVLYIIP SFKPTTCLVL 1440 ERVIQQIMWI TTCSNISIIL LASEGMKDQI PELDAQLATI FNSLNPYKAN LEDFDLIFLA 1500 YTTLEAKLTV VCFRGYAHYV GSPPQ* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
TIGR02472 | sucr_P_syn_N | 3.0e-66 | 271 | 755 | 493 | + sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
cd03800 | GT1_Sucrose_synthase | 6.0e-123 | 270 | 754 | 486 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
PLN00142 | PLN00142 | 0 | 11 | 796 | 800 | + sucrose synthase |
TIGR02470 | sucr_synth | 0 | 24 | 793 | 785 | + sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
pfam00862 | Sucrose_synth | 0 | 11 | 546 | 547 | + Sucrose synthase. Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. |
Gene Ontology | |
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GO Term | Description |
GO:0005985 | sucrose metabolic process |
GO:0009058 | biosynthetic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s29_H | 0 | 14 | 796 | 16 | 808 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3s29_G | 0 | 14 | 796 | 16 | 808 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3s29_F | 0 | 14 | 796 | 16 | 808 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3s29_E | 0 | 14 | 796 | 16 | 808 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3s29_D | 0 | 14 | 796 | 16 | 808 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |