Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11632.1-v1.0-hybrid |
Family | AA2 |
Protein Properties | Length: 837 Molecular Weight: 89753.4 Isoelectric Point: 8.6451 |
Chromosome | Chromosome/Scaffold: Start: 9317798 End: 9329997 |
Description | ascorbate peroxidase 6 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 106 | 264 | 3.09967e-42 |
SKGKAAGVLRFVFHDAGTFQLDDNSGGMNGSVIYELDRPENKGLKTPFKACILIYLFLYLQILEKAKNEVDAVQPVSWADMIAVAGAEAVSVCGGPTIRV ALGRLDSKEPDPEGKLPEETLDAAGLKQSFQTKGFSTQELVALSGAHTLGNKGFGSPTV |
Full Sequence |
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Protein Sequence Length: 837 Download |
MASTAVSLLC STTSPSSIFP FNPTLPAKSS SPVNCLPAAD ASSSSGNSKA NSNQTGLVCR 60 RGLVFTLTAT LPLLLPPFWE AFTAKAVEPD TSVYEVMKEE ISKVVSKGKA AGVLRFVFHD 120 AGTFQLDDNS GGMNGSVIYE LDRPENKGLK TPFKACILIY LFLYLQILEK AKNEVDAVQP 180 VSWADMIAVA GAEAVSVCGG PTIRVALGRL DSKEPDPEGK LPEETLDAAG LKQSFQTKGF 240 STQELVALSG AHTLGNKGFG SPTVFDNSYF KVLIEESVSS GSMSSMTGLP SDRALPKDEE 300 CLRNTGEKES PGLLNPKRSA LFRVGSSDPP PPSSPSLAAS LRSFKAWTSD WKSALIECFR 360 LEMRVRFSIL SVGLVKNGSV ALENGDHGQL NVGPDAINGS ASETALTESA ALNGKMENVV 420 NSDDGVSNNS SAGEVKEESR VNSSNGLKIA KERGPKVSVQ SKQFKVQKGQ GKSKIEKPPS 480 PKIALPTSMK KSKDGNDAEA TATVSNDLAA PISRAKQPNK SRSSNGPQVQ LSDQQPKQSE 540 APSTEGLVEK TDLKPLIKGS YKADGDSQSS LSPTEGDKPP RVGTLPNYGF SFRCDERAEK 600 RREFYTKLEE KIHAKEMEKN NLQAKSKETL EAEIKMLRKK LTFKATPMPS FYQEPPPPKV 660 ELKKLPTTRA KSPKLGRKKS LPAADSEGNS TTKSQSGRLS LGEKVPQNSA KGPSPVLPKK 720 PQRKSLPRLP SETTTLSGVK NVRKVTSKAI KEEKNNLINA MNEEAATLPS AASGAGPHIQ 780 EQEVVPRAEI TEPYTEEPET VPRAVISEEQ SHSDDDTVNE EEHHPTLVQE PISLAN* 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00693 | secretory_peroxidase | 2.0e-26 | 93 | 274 | 239 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
PLN02608 | PLN02608 | 3.0e-27 | 104 | 300 | 209 | + L-ascorbate peroxidase | ||
pfam00141 | peroxidase | 1.0e-38 | 93 | 253 | 169 | + Peroxidase. | ||
cd00314 | plant_peroxidase_like | 6.0e-43 | 110 | 303 | 225 | + Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised of classic extracellular plant peroxidases, like horseradish peroxidase. | ||
cd00691 | ascorbate_peroxidase | 9.0e-45 | 94 | 300 | 224 | + Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0006979 | response to oxidative stress |
GO:0020037 | heme binding |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1apx_D | 1e-22 | 87 | 298 | 7 | 213 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_C | 1e-22 | 87 | 298 | 7 | 213 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_B | 1e-22 | 87 | 298 | 7 | 213 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 1apx_A | 1e-22 | 87 | 298 | 7 | 213 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
PDB | 2xj6_A | 4e-22 | 113 | 298 | 35 | 213 | A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase |
Sequence Alignments (This image is cropped. Click for full image.) |
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