Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11879.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 619 Molecular Weight: 70675.5 Isoelectric Point: 9.0684 |
Chromosome | Chromosome/Scaffold: 5 Start: 21840035 End: 21842671 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 290 | 570 | 0 |
EQKLKVYVYTEGEKPIFHQPLMRGIYASEGWFMKLIEGNKKYSVRDPRKAHLFYLPFDSHMLRLKLNGTSKKGLEMYLKRYVGVIAKKYPFWNRTGGSDH FLVACHDWAPRITSKYMGSCIRSLCNANVARDFKIGKDTSLPVTYIRSVEDPLANLGGKPASERSILAFFAGGMHGYLRPILLHYWENKEPDMKIFGPMP RDIESKRLYREYMKSSKYCICARGYEVHTPRVVEAIFYECVPVIISDNYVPPFFEVFNWETFSVFIQEKDIPNLRNILMSI |
Full Sequence |
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Protein Sequence Length: 619 Download |
MEVAALTQRL CSFEIRRLVL MIGVAVVIVV VHQCFELPYG KDFYFSPADA GLASVVTLLG 60 NDTSSNDSET RKFDVVGVVG VMVNETDVLG LEEFELEKKK DASNITVQKS FPVGINRSED 120 DKPVEGKIID FRDDSVPRDS RLGESNKVEN DPKPISASEF QNGDGIVSVV AQGAGTDSPE 180 AVSKGDIKQT TEPLQFVSVT LHDVSSMTSI STLRKWNPRP TSISQMNSLL LQSPISSSSM 240 KPRRYSTRDR ELQSAKLEIE NAHITRDNPG LSASIFRNLS KFIRSYDLME QKLKVYVYTE 300 GEKPIFHQPL MRGIYASEGW FMKLIEGNKK YSVRDPRKAH LFYLPFDSHM LRLKLNGTSK 360 KGLEMYLKRY VGVIAKKYPF WNRTGGSDHF LVACHDWAPR ITSKYMGSCI RSLCNANVAR 420 DFKIGKDTSL PVTYIRSVED PLANLGGKPA SERSILAFFA GGMHGYLRPI LLHYWENKEP 480 DMKIFGPMPR DIESKRLYRE YMKSSKYCIC ARGYEVHTPR VVEAIFYECV PVIISDNYVP 540 PFFEVFNWET FSVFIQEKDI PNLRNILMSI PDEKYLMMKS EVKMVQQHFF WHKKPVKYDL 600 FHMILHSVWY NRILQLKK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 8.0e-64 | 289 | 570 | 302 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |