Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11880.1-v1.0-hybrid |
Family | GT47 |
Protein Properties | Length: 687 Molecular Weight: 78652.5 Isoelectric Point: 8.7586 |
Chromosome | Chromosome/Scaffold: 5 Start: 21864293 End: 21866892 |
Description | Exostosin family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 355 | 638 | 0 |
ERTLKVYIYKEGNKPIFHQPIMKGLYASEGWFMKLMEGDKRFVVKDPRKAHLFYMPFSSRMLEFTLYVRNSHNRTKLRQYLKEYSETIAAKYPFWNRTGG ADHFLVACHDWAPYETRHHMERCIKALCNADVTQGFKIGRDISLPETYVRSARNPLRDLGGKRASERQVLTFYAGNMHGYLRPILLKYWKDKDPDMKIFG PMPPGVASKMNYIEHMKSSKYCLCPKGYEVNSPRVVEAIFYECIPVIISDNFVPPFFEVLNWEAFSLILAEKDIPNLKNILLSI |
Full Sequence |
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Protein Sequence Length: 687 Download |
MDCSVQFLKL CHIETRRRLL VLGVVAVTYL MFQWLLLPYE NALQSLLPRS QVPDHATGSF 60 LTIHSSAKSV MVRNPLTVNS SDLIDAPRFG GVEKYADNSS LGGETVDKSE PNEKEGFKEI 120 DSVLEEKEMD NTFEHAADRN VDENFPSGNG VDTDASLTLV SISKEENGSN LVKTNEASYD 180 FPEPTVLSKD EVSTENTLEV NMTMAAKHSE GVKTIFPSSP LILPATASFT HQTDVTYVSY 240 LVSNASSSVG SAFLESDIVT IKNDSLTRTS PGKKMMKCNM PPKSITSIDE MNLTLVRHHA 300 KPRALRPRWS SVRDQDILAV KSQIQHPPVA KNDRELYAPL YRNVSMFKRS YELMERTLKV 360 YIYKEGNKPI FHQPIMKGLY ASEGWFMKLM EGDKRFVVKD PRKAHLFYMP FSSRMLEFTL 420 YVRNSHNRTK LRQYLKEYSE TIAAKYPFWN RTGGADHFLV ACHDWAPYET RHHMERCIKA 480 LCNADVTQGF KIGRDISLPE TYVRSARNPL RDLGGKRASE RQVLTFYAGN MHGYLRPILL 540 KYWKDKDPDM KIFGPMPPGV ASKMNYIEHM KSSKYCLCPK GYEVNSPRVV EAIFYECIPV 600 IISDNFVPPF FEVLNWEAFS LILAEKDIPN LKNILLSIPD EKYLQMQLAV KRVQKHFLWH 660 PKPLKYDLFH MTLHSIWYNR LFQIKI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 2.0e-63 | 354 | 638 | 307 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |