| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna11940.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 441 Molecular Weight: 49199.1 Isoelectric Point: 4.6304 |
| Chromosome | Chromosome/Scaffold: 5 Start: 23894120 End: 23896328 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA1 | 1 | 244 | 0 |
| MQPRNPWSDGPEYITQCPIQPGTNFTYEVILSKEEGTVWWHAHSDWTRASVHGAIVILPAVGTTIPFPKPDEDEVIVIASWYKGDLQARVDEAMENDENL PHSDAYTINGQPGDLCPCSNVNANIDADIFFAIAQHNFTVVGLDGAYIKPIDTTYILLSPGQTMDVQVLGSYYMAARHFSSENVAVGDFDHANVTAILEY NGNYTHLTSPVFPSSLPMYYDFAAYQNFTNRIRSLATPEYAIQA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 441 Download |
| MQPRNPWSDG PEYITQCPIQ PGTNFTYEVI LSKEEGTVWW HAHSDWTRAS VHGAIVILPA 60 VGTTIPFPKP DEDEVIVIAS WYKGDLQARV DEAMENDENL PHSDAYTING QPGDLCPCSN 120 VNANIDADIF FAIAQHNFTV VGLDGAYIKP IDTTYILLSP GQTMDVQVLG SYYMAARHFS 180 SENVAVGDFD HANVTAILEY NGNYTHLTSP VFPSSLPMYY DFAAYQNFTN RIRSLATPEY 240 AIQAQVVKRN KSVQANISGV YSADFPDYPP SFYNFTEESY SIDTVLTVQG RKVKVLNYNE 300 SVEIVFQGTN VLDGSVNHPM HLHGYSFYVV GYGFGIYDNA TDPKGFNLID PPEVTTFGVP 360 KNGWLAIRFT ANNSGVWFWH CYMDRHLTWG MEAAFIVKNG DTNETSIRKP PTDMPLCTIP 420 LHSGLKDFPE IITTKKGDYL * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| TIGR03388 | ascorbase | 5.0e-9 | 6 | 82 | 78 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| TIGR03388 | ascorbase | 5.0e-25 | 136 | 395 | 292 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
| pfam07731 | Cu-oxidase_2 | 9.0e-26 | 264 | 401 | 142 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. |
| PLN02604 | PLN02604 | 1.0e-30 | 6 | 395 | 461 | + oxidoreductase |
| TIGR03389 | laccase | 7.0e-142 | 2 | 417 | 484 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 2e-31 | 1 | 395 | 65 | 521 | A Chain A, Crystal Structure Of The Extracellular Domain Of Human Gaba(B) Receptor Gbr2 |
| PDB | 1asq_A | 2e-31 | 1 | 395 | 65 | 521 | A Chain A, Crystal Structure Of The Extracellular Domain Of Human Gaba(B) Receptor Gbr2 |
| PDB | 1asp_B | 2e-31 | 1 | 395 | 65 | 521 | A Chain A, Crystal Structure Of The Extracellular Domain Of Human Gaba(B) Receptor Gbr2 |
| PDB | 1asp_A | 2e-31 | 1 | 395 | 65 | 521 | A Chain A, Crystal Structure Of The Extracellular Domain Of Human Gaba(B) Receptor Gbr2 |
| PDB | 1aso_B | 2e-31 | 1 | 395 | 65 | 521 | A Chain A, Crystal Structure Of The Extracellular Domain Of Human Gaba(B) Receptor Gbr2 |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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