Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna12105.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 563 Molecular Weight: 61386.1 Isoelectric Point: 5.6329 |
Chromosome | Chromosome/Scaffold: 5 Start: 24623275 End: 24625305 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 249 | 544 | 0 |
VVVSKDGSGNFTTINDAITAAPNNSVASDGYFLVYVTAGVYEEYVSIASNKQYLLLIGDGINQTIITGNRNVVDGSTTFDSATLAVVAEGFVGVNITVRN TAGPSKMQAVAVRNGADLSVFYSCSFEAYQDTLYAHSLRQFYRECDIYGTVDFIFGNAALVLQNCNLYPRQPLKGQSNPITAQGRTDPNQNTGTSIQNCT ITAAADLASSNFTVKTYLGRPWKEYSRTVYLQNFMDSLIDPVGWLEWDGDFALSTLYYAEYDNRGPGSNTSSRVTWPGYHIIGATDAANFTVSNFL |
Full Sequence |
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Protein Sequence Length: 563 Download |
MASTKLFNPL SLFLILFSLL ISHSSSADVP LNTSLPPETI CNSTPHPSYC LSVLPHKNAN 60 VYEFGRFSVN HSLLQSQNLM VSLNQYLQSY RSSLSQTAIQ ALEDCKFLAS MNIDFISNTM 120 QKVNTTGDAV LPSSDADDLQ TLLSAIMTNQ QTCSDALRSV TTVQDELLVP LLNCTSMYSV 180 SLALFTQGWV PKGHKNPNGT PNHLKFRKGR LSLKMSSKAR GVYDWVISRP GRRLLQAAGD 240 EEVVVKDIVV VSKDGSGNFT TINDAITAAP NNSVASDGYF LVYVTAGVYE EYVSIASNKQ 300 YLLLIGDGIN QTIITGNRNV VDGSTTFDSA TLAVVAEGFV GVNITVRNTA GPSKMQAVAV 360 RNGADLSVFY SCSFEAYQDT LYAHSLRQFY RECDIYGTVD FIFGNAALVL QNCNLYPRQP 420 LKGQSNPITA QGRTDPNQNT GTSIQNCTIT AAADLASSNF TVKTYLGRPW KEYSRTVYLQ 480 NFMDSLIDPV GWLEWDGDFA LSTLYYAEYD NRGPGSNTSS RVTWPGYHII GATDAANFTV 540 SNFLVGDNWL PQTGVPYTGG LV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 4.0e-149 | 27 | 561 | 542 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 9.0e-150 | 101 | 561 | 464 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 7.0e-180 | 257 | 547 | 292 | + Pectinesterase. | ||
PLN02713 | PLN02713 | 0 | 27 | 562 | 546 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 36 | 562 | 543 | + Probable pectinesterase/pectinesterase inhibitor; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 250 | 561 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 241 | 561 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 1e-20 | 249 | 512 | 6 | 300 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 1e-20 | 249 | 512 | 6 | 300 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 1e-20 | 249 | 512 | 6 | 300 | A Chain A, Pectin Methylesterase From Carrot |