Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna12106.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 567 Molecular Weight: 61413.9 Isoelectric Point: 5.6615 |
Chromosome | Chromosome/Scaffold: 5 Start: 24628297 End: 24630109 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 253 | 548 | 0 |
VVVSQDGTGNFTTINDAINAAPNNTVASDGYFLVYITAGVYEEYVSIISKKKYLLLIGDGINQTIITGSNSVGGGSTTFNSATLAVVATGFIAVNITVRN TAGPSMGQAVAVRNGADLSVFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVFQNCNIYPRQPRQGQTNPITAQGRTDPNQNTGTSIQNCT ITAADDLASSNFTVKTYLGRPWKEYSRTVYLQNFMDSLIDPAGWLAWSGDFALSTLYYGEYDNKGPGADTSNRVTWPGYHIIGATDASNFTVSNFV |
Full Sequence |
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Protein Sequence Length: 567 Download |
MASKLFNPLV TSSLSLLFLI IFALFISQPS AADVPLNTSV PPETICKSTP HPSVCTSVLP 60 HKNANVYDFG RFSVQYSFVQ SQKLLDLINK YLQGGSSLSQ LEIQALEDCK SLALLNIDFL 120 SNALETVNKT SDVLPSSDAD DVQTLLSAIL TNQQTCFDGL QSVSSVQNDL SVSVSNGTNF 180 YSVSLALVTK GWVPKGHKSN GTPNQSRKHL SFREGRLSLK MSSKARAVYD SVINRRRHLL 240 QAGDEEVVVK DIVVVSQDGT GNFTTINDAI NAAPNNTVAS DGYFLVYITA GVYEEYVSII 300 SKKKYLLLIG DGINQTIITG SNSVGGGSTT FNSATLAVVA TGFIAVNITV RNTAGPSMGQ 360 AVAVRNGADL SVFYSCSFEG YQDTLYTHSM RQFYRECDIY GTVDFIFGNA AVVFQNCNIY 420 PRQPRQGQTN PITAQGRTDP NQNTGTSIQN CTITAADDLA SSNFTVKTYL GRPWKEYSRT 480 VYLQNFMDSL IDPAGWLAWS GDFALSTLYY GEYDNKGPGA DTSNRVTWPG YHIIGATDAS 540 NFTVSNFVLG DSWLPQTGVP YTGGLM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02416 | PLN02416 | 1.0e-141 | 44 | 565 | 528 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 3.0e-145 | 32 | 565 | 541 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-170 | 256 | 551 | 297 | + Pectinesterase. | ||
PLN02713 | PLN02713 | 0 | 29 | 565 | 545 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 41 | 566 | 543 | + Probable pectinesterase/pectinesterase inhibitor; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 254 | 565 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 245 | 565 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 6e-21 | 256 | 555 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 6e-21 | 256 | 555 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 6e-21 | 256 | 555 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |