Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna12107.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 566 Molecular Weight: 61550.3 Isoelectric Point: 6.9212 |
Chromosome | Chromosome/Scaffold: 5 Start: 24633933 End: 24635761 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 252 | 547 | 0 |
VVVSQDGTGNFTTINDAINAAPNNSVASDGYFLVYITAGVYQEYVSISSKKKYLLMIGDGINQTIITGNHSVGDGWTTFNSPTFAVAAQGFVAVNITFQN KAGPSKGQAVAVRNDGDLSVFYSCSFEAYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVAFQNCNIYPRRPLQGQSNTITAQGRTDVNQNTGISIQNCT VTAAADLASSTFTVKNYLGRPWKEYSRTIFMQGFIDSFIDPAGWLAWNGDFALSTLYYAEYNNSGPGSNTNNRVTWPGYHVIGATEAANFTVSNFI |
Full Sequence |
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Protein Sequence Length: 566 Download |
MASKLYSLVT LSSILFLTIF SLLTSPSLAV DVLLNTPLSS ETICNSTPHP SYCKSVLPRK 60 SANVYDFGRF SVQQSLVQSK ILLDLLEKYL SGRRSSLTLP AIQALEDCHF LASLNIDFLS 120 QAIGTVGETS NVLPSSDADD VQTLLSAILT NQQTCADGLN SLATVHNDLI VPLSNGTNLY 180 SVSLALFTKG WVPKGGKNNV TPGQSYRHLN FRKGRLSLKM SSKVRAVYDS VINRRRHLLQ 240 AGDEEVVVKD IVVVSQDGTG NFTTINDAIN AAPNNSVASD GYFLVYITAG VYQEYVSISS 300 KKKYLLMIGD GINQTIITGN HSVGDGWTTF NSPTFAVAAQ GFVAVNITFQ NKAGPSKGQA 360 VAVRNDGDLS VFYSCSFEAY QDTLYTHSMR QFYRECDIYG TVDFIFGNAA VAFQNCNIYP 420 RRPLQGQSNT ITAQGRTDVN QNTGISIQNC TVTAAADLAS STFTVKNYLG RPWKEYSRTI 480 FMQGFIDSFI DPAGWLAWNG DFALSTLYYA EYNNSGPGSN TNNRVTWPGY HVIGATEAAN 540 FTVSNFILGD NWLPQTGVPY TGGLI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 9.0e-150 | 104 | 564 | 464 | + pectinesterase/pectinesterase inhibitor | ||
PLN02416 | PLN02416 | 2.0e-150 | 34 | 564 | 538 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 29 | 565 | 544 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 44 | 565 | 538 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 255 | 550 | 297 | + Pectinesterase. |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 253 | 564 | 6 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 244 | 564 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 9e-23 | 255 | 554 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 9e-23 | 255 | 554 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 9e-23 | 255 | 554 | 12 | 339 | A Chain A, Pectin Methylesterase From Carrot |