Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna12627.1-v1.0-hybrid |
Family | GH35 |
Protein Properties | Length: 813 Molecular Weight: 90297 Isoelectric Point: 8.0149 |
Chromosome | Chromosome/Scaffold: 1 Start: 5471437 End: 5476189 |
Description | beta-galactosidase 12 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 108 | 409 | 0 |
IIDGQKRILLSGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGKYYFEDRYDLVKFIKLVKQAGLYVHLRIGPYVCAEWNFGGFPAWLKY VPGIEFRTDNEPFKAAMKTFTEKIVGMMKAEGLFQPQGGPIIMSQIENEYGPVEWEIKAPGKAYTNWTAQMALGLDTGVPWIMCKQEDAPDPIIDTCNGF YCENFTPNKKYKPKMWTEVWTGWYTEFGGAVPTRPAQDLAFSVARFIQNGGSFANYYMYHGGTNFDRTSGLFVATSYDYDAPLDEYGLPREPKWSHLKYL HK |
Full Sequence |
---|
Protein Sequence Length: 813 Download |
MISTPPCRHS STPQQTPSGT QFPLSDLKRL AGKSAGLVLP AGFLLYLYII SVCLGGANVA 60 STWCQCGIHS MWNCNKLKAN ASMFLLLFLF SWLSSATASV SYDHRAIIID GQKRILLSGS 120 IHYPRSTPEM WPDLIQKAKD GGLDVIQTYV FWNGHEPSPG KYYFEDRYDL VKFIKLVKQA 180 GLYVHLRIGP YVCAEWNFGG FPAWLKYVPG IEFRTDNEPF KAAMKTFTEK IVGMMKAEGL 240 FQPQGGPIIM SQIENEYGPV EWEIKAPGKA YTNWTAQMAL GLDTGVPWIM CKQEDAPDPI 300 IDTCNGFYCE NFTPNKKYKP KMWTEVWTGW YTEFGGAVPT RPAQDLAFSV ARFIQNGGSF 360 ANYYMYHGGT NFDRTSGLFV ATSYDYDAPL DEYGLPREPK WSHLKYLHKA IKLAEAALVA 420 TDPAVSSLGK SQEAHVFNST SGCAAFLANY DTKYSSRVSF GNRQYKLPPW SISILPDCIT 480 DVLNTGRVGQ SPPVDMTPVN TTLSWQSYIE DAASSADDST FTLDGLYEQI NITRDATDYL 540 CITIGPNEEF LKNGSYPLLT IDSAGHALHV FINGQLSGTV YAGLAFPKLR FNDTVKLRAG 600 INKLALLSIA VGLPNVGLHF ETWNAGVLGP VTLKGLNSGT WNMSRWKWTY KIGMRGEALS 660 LHTVKGSSSV EWVEGPLLAQ KQPLTWYKSI FRAPPGNAPL ALDMISMGKG QVWINGRSIG 720 RHWPGYIAHG SCGNCSYAGT YTENKCRTNC GQPSQRWYHV PRSWLNQSEN LLVVFEEWGG 780 DPTKISLVAR SYESLEQTLY NIASSNHLRL QL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.001 | 122 | 258 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 4.0e-23 | 100 | 410 | 375 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-157 | 106 | 411 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 100 | 795 | 702 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 1.99965e-42 | 93 | 439 | 1 | 362 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 9.99995e-41 | 99 | 426 | 10 | 350 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 9.99995e-41 | 99 | 426 | 10 | 350 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |