Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna12871.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 664 Molecular Weight: 72297.6 Isoelectric Point: 9.157 |
Chromosome | Chromosome/Scaffold: 7 Start: 20602843 End: 20607336 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 349 | 645 | 0 |
DIIVSKDGNGTCKTISEAIKKAPEYSSRRIVIYIKAGRYEENNLKVGRKKTNLMFIGDGKGVTTITGGKSVSESLTTFHTASFAATGAGFIARDITFENY AGPAKHQAVALRVGADHAVVYRCNIIGYQDTFYVHSNRQFIRECAIYGTVDFIFGNAAVVFQNCSIFARKPMPSQKNTITAQNRKDPNQNTGMSIHACRI LATPDLQPVKGSFPTYLGRPWKMYSRVVYMLSYIGDHVEPRGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVITSIVEASKFTVAEFIY |
Full Sequence |
---|
Protein Sequence Length: 664 Download |
MQLRRVTNLP LILNTSIAVL EYAPHSIFNL KPHFPSSSHS QLAGCKEKTL TLTLLQTYSP 60 EFPMGYGRLQ PPDTRGSSSY IGDQSPPPQA PPSKSKKKLI ILSILSITLI AAAAVSSVVL 120 IVGRSSPSAN SSASLLHRKP TQAISDACSK TRFPSLCVDS LLDFPGSLNA SESDLVHISF 180 NMTLQHLNKA LYLSSGLSNL QMDPRAKSAY QDCLELLDDS VDALTRALTT VAPGRDGSAG 240 SSQDVLTWLS SALTNQDTCG EGLADVSGAV KEELGQKLKD LSELVSNCLA IFTATSSNDF 300 SGVPIQNRRL LMERDIMGDN ADISRDFPRW LGKKERRLLA LPVAQIQADI IVSKDGNGTC 360 KTISEAIKKA PEYSSRRIVI YIKAGRYEEN NLKVGRKKTN LMFIGDGKGV TTITGGKSVS 420 ESLTTFHTAS FAATGAGFIA RDITFENYAG PAKHQAVALR VGADHAVVYR CNIIGYQDTF 480 YVHSNRQFIR ECAIYGTVDF IFGNAAVVFQ NCSIFARKPM PSQKNTITAQ NRKDPNQNTG 540 MSIHACRILA TPDLQPVKGS FPTYLGRPWK MYSRVVYMLS YIGDHVEPRG WLEWNTTFAL 600 DTLYYGEYMN YGPGGAVGQR VKWPGYRVIT SIVEASKFTV AEFIYGSSWL PSTGVAFLGG 660 LSV* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02314 | PLN02314 | 3.0e-169 | 140 | 661 | 534 | + pectinesterase | ||
PLN02201 | PLN02201 | 1.0e-177 | 179 | 663 | 488 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02484 | PLN02484 | 0 | 136 | 663 | 529 | + probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 349 | 647 | 299 | + Pectinesterase. | ||
PLN02301 | PLN02301 | 0 | 140 | 661 | 524 | + pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 349 | 661 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 346 | 661 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-19 | 353 | 652 | 12 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-19 | 353 | 652 | 12 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-18 | 353 | 652 | 12 | 340 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |