| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna12887.1-v1.0-hybrid |
| Family | GT5 |
| Protein Properties | Length: 646 Molecular Weight: 70565 Isoelectric Point: 6.1753 |
| Chromosome | Chromosome/Scaffold: 7 Start: 20708553 End: 20712062 |
| Description | Glycogen/starch synthases, ADP-glucose type |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 139 | 634 | 0 |
| IVFVTAEAAPYSKTGGLGDVCGSLPVVLAGRGHRVMVVSPRYQNGTAADKKFSGAVDVGHTTVICFGGEQEVAFFHEYREGVDWVFVDHPSFHRPGNPYG DSFGAFGDNQFRFTLLAHAACEAPLVLPLGGYTYGQNCLFMVNDWHAGLVPLLLAAKYRPHGVYTDARSVLVIHNLAHQGVESAVTYKNLGLPAEWYGAL EWVFPEWARAHALDRGEAVNILKGAVVTTDRILTVSEGYAWEITTVEGGYGLNGLISSRKSVLNGITNGIDVVEWDPSTDKHIASHYSANDLSGKVECKI ALQKELGLPIRPDCPLIGFIGRLDYQKGIDLIQSGIPELMNEDVQFVMLGSGDVQCQDWMRLAEATYKDKFRGWVGFNVPVSHRITAGCDILLMPSRFEP CGLNQLYAMRYGTVPVVHSTGGLRDTVVNFNPYAPGGGEGTGWTFSPLTKESMLAALRLAIRTYKEYKPSWDGLVKRGMEKDFTWESAAIQYEQVI | |||
| Full Sequence |
|---|
| Protein Sequence Length: 646 Download |
| MESLNFTTLI PCKSSSGNLA RPKWAANHHD VISQMGFAPL WIKRSKTEAL RLRATFSSKA 60 GSQDGASVVE DQKQKEEEKG VRFGAERDSS GSVIGFNLSP PNGEVAIDDG DVGSDRIEIA 120 EDVSGKEKPK AKAKVTRSIV FVTAEAAPYS KTGGLGDVCG SLPVVLAGRG HRVMVVSPRY 180 QNGTAADKKF SGAVDVGHTT VICFGGEQEV AFFHEYREGV DWVFVDHPSF HRPGNPYGDS 240 FGAFGDNQFR FTLLAHAACE APLVLPLGGY TYGQNCLFMV NDWHAGLVPL LLAAKYRPHG 300 VYTDARSVLV IHNLAHQGVE SAVTYKNLGL PAEWYGALEW VFPEWARAHA LDRGEAVNIL 360 KGAVVTTDRI LTVSEGYAWE ITTVEGGYGL NGLISSRKSV LNGITNGIDV VEWDPSTDKH 420 IASHYSANDL SGKVECKIAL QKELGLPIRP DCPLIGFIGR LDYQKGIDLI QSGIPELMNE 480 DVQFVMLGSG DVQCQDWMRL AEATYKDKFR GWVGFNVPVS HRITAGCDIL LMPSRFEPCG 540 LNQLYAMRYG TVPVVHSTGG LRDTVVNFNP YAPGGGEGTG WTFSPLTKES MLAALRLAIR 600 TYKEYKPSWD GLVKRGMEKD FTWESAAIQY EQVIEWAFID PPYVA* 660 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 8.0e-104 | 138 | 632 | 500 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 5.0e-145 | 139 | 631 | 497 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 2.0e-174 | 139 | 633 | 503 | + glycogen synthase; Provisional | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 139 | 636 | 498 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| TIGR02095 | glgA | 0 | 139 | 633 | 496 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 138 | 634 | 11 | 508 | A Chain A, Crystal Structure Of Leuconostoc Mesenteroides Nrrl B-1299 N- Terminally Truncated Dextransucrase Dsr-E In Triclinic Form |
| PDB | 3vue_A | 0 | 138 | 634 | 11 | 508 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 138 | 633 | 2 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 138 | 633 | 2 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 138 | 633 | 2 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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