| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna12962.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 480 Molecular Weight: 52087.7 Isoelectric Point: 9.1044 |
| Chromosome | Chromosome/Scaffold: 1 Start: 6637443 End: 6639765 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 186 | 462 | 0 |
| NVVVAKDGSGNYKTVSEAIQAATGGRFVIYVKAGVYKEKIKTNKDGITLIGDGQYSTIITGDSSVSKAVTGDGFIARDIGFQNTAGPDAEQALALYISSD HSVLYKCSIVGYQDTLYALALRQFYRECDIYGSIDFIFGNAAAVFQSCNIVLRRHKGYNAILASGRSDPGQKTGFSVQNCRIVPGSDLSPIKHSYSSYLG RPWKDYARAVVMQSNIDDVISPRGWVEWPGSSPKSIYFAEFANVGSGAGVSQRVQWPGFHVIGADVAVEYTVGNFIA | |||
| Full Sequence |
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| Protein Sequence Length: 480 Download |
| MGLGGSGSGH QDPQHVDIMS ALVNKTIYET RLTSSEFSKF SSQLFEVRDS QPTHDSGSKD 60 YCEELMTMSL KRLEQSLIAL KKSPSKNKQD IQAWLSAALT FQETCKDYAA DHGLSLTSSE 120 NLRLDLSKRI GYTSQLGSNL LALVNRVSSN SDNPKNTTRG KKAEMFPKWV SPKNRKLLQA 180 TTVKANVVVA KDGSGNYKTV SEAIQAATGG RFVIYVKAGV YKEKIKTNKD GITLIGDGQY 240 STIITGDSSV SKAVTGDGFI ARDIGFQNTA GPDAEQALAL YISSDHSVLY KCSIVGYQDT 300 LYALALRQFY RECDIYGSID FIFGNAAAVF QSCNIVLRRH KGYNAILASG RSDPGQKTGF 360 SVQNCRIVPG SDLSPIKHSY SSYLGRPWKD YARAVVMQSN IDDVISPRGW VEWPGSSPKS 420 IYFAEFANVG SGAGVSQRVQ WPGFHVIGAD VAVEYTVGNF IAGTSWLPST GVTFVSGLH* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02201 | PLN02201 | 1.0e-124 | 23 | 478 | 491 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02484 | PLN02484 | 4.0e-129 | 52 | 478 | 458 | + probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 5.0e-138 | 15 | 478 | 485 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 2.0e-146 | 192 | 463 | 291 | + Pectinesterase. | ||
| PLN02698 | PLN02698 | 0 | 16 | 479 | 482 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 183 | 479 | 1 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 179 | 478 | 1 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 3e-25 | 186 | 437 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 3e-25 | 186 | 437 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 4e-25 | 186 | 437 | 5 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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