Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna12965.1-v1.0-hybrid |
Family | CE8 |
Protein Properties | Length: 546 Molecular Weight: 60034.5 Isoelectric Point: 5.3634 |
Chromosome | Chromosome/Scaffold: 1 Start: 6649737 End: 6651587 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 236 | 529 | 0 |
LTVSADGSGNFTTISDAVNFAPNNSFDRIIIYVKKGFYDENVEIPSWKTNIVLLGDGSDITVISGIRSVADGWTTFRSATLAVSGEGFLARDIGIENRAG PEKHQAVALRVNADLAALYKCAFSGYQDTMYVHSFRQFYRECDISGTIDYIFGNAAVVIQDCNIVSKMPMPGQFTVITAQARDSEEEDTGISIQNCSVVA ADDLYANKGSVKSYLGRPWRVYSRTVFLESYIDDFIDPSGWKDWSGDLGLDTLYYGEYENYGPGSGTDSRVNWTGYHIMDYYDASNFSVSEFIV |
Full Sequence |
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Protein Sequence Length: 546 Download |
MASSSPKVLL QLLLVCMIFF STTKALNNSS SSSSTTNTLN PHLSSIKSFC KSTPYPDVCF 60 DSLKLSISIN ISPNILTYLL QSLQIALSEA TKLSDLFYKA GLYSNIVEKQ KGAIQDCKDL 120 HQITLSSIRR SVSGVKSSNS KKLRDAKAYL SAALTNKNTC LEGLDSASGP MKPTLVSSLT 180 STYKYVSNSL SALKSQVPSP KGRKNRRLLG VPAWISRRDR RILESSGDEY DPSEVLTVSA 240 DGSGNFTTIS DAVNFAPNNS FDRIIIYVKK GFYDENVEIP SWKTNIVLLG DGSDITVISG 300 IRSVADGWTT FRSATLAVSG EGFLARDIGI ENRAGPEKHQ AVALRVNADL AALYKCAFSG 360 YQDTMYVHSF RQFYRECDIS GTIDYIFGNA AVVIQDCNIV SKMPMPGQFT VITAQARDSE 420 EEDTGISIQN CSVVAADDLY ANKGSVKSYL GRPWRVYSRT VFLESYIDDF IDPSGWKDWS 480 GDLGLDTLYY GEYENYGPGS GTDSRVNWTG YHIMDYYDAS NFSVSEFIVG DEWLQYTSFP 540 YDDGI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02201 | PLN02201 | 5.0e-158 | 145 | 545 | 411 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-159 | 109 | 545 | 438 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 1.0e-166 | 48 | 545 | 536 | + Probable pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 2.0e-179 | 237 | 531 | 296 | + Pectinesterase. | ||
PLN02416 | PLN02416 | 0 | 1 | 545 | 546 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 236 | 545 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 238 | 545 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-22 | 235 | 500 | 7 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-22 | 235 | 500 | 7 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-22 | 235 | 500 | 7 | 311 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |