| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna13566.1-v1.0-hybrid |
| Family | GH5 |
| Protein Properties | Length: 463 Molecular Weight: 52208.9 Isoelectric Point: 4.9686 |
| Chromosome | Chromosome/Scaffold: 6 Start: 7843448 End: 7845275 |
| Description | Glycosyl hydrolase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH5 | 80 | 410 | 2.1e-33 |
| NDQPFYVNGFNTYWLMVFAADQSTRGKVTDVFKQAASVGLTICRTWAFNDGQWRALQKSPAVYDEEALDFVISEAKKYKIRLILSLTNNWDAYGGKPQYI KWGKAAGLNLTSDDDFFSHPTLKSYYKAHTVLNRVNTLTNITYKDDPTVFAWELMNEPRCTSDPSGDTLQEWIQEMAVFVKSVDPKHLVEIGLEGFYGPS TLDRVQFNPNTYAQQVGTDFIRNHQVLGVDFASVHIYADSWISQSISDVHLQFTESWIKAHIDDAEKYLGMPVVFAEFGVSTKDPGYNTSFRDTVINTVY KTLLNSTKKGGSGGGSLLWQLFPDGTDYMDD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 463 Download |
| MDTQRTKSVL QNILVVTTIF MTLISTLCAA SGVEQLETMV EEAEDHLAFP STSNWITEMN 60 GMEDEEWAMV QKKGNQFVVN DQPFYVNGFN TYWLMVFAAD QSTRGKVTDV FKQAASVGLT 120 ICRTWAFNDG QWRALQKSPA VYDEEALDFV ISEAKKYKIR LILSLTNNWD AYGGKPQYIK 180 WGKAAGLNLT SDDDFFSHPT LKSYYKAHTV LNRVNTLTNI TYKDDPTVFA WELMNEPRCT 240 SDPSGDTLQE WIQEMAVFVK SVDPKHLVEI GLEGFYGPST LDRVQFNPNT YAQQVGTDFI 300 RNHQVLGVDF ASVHIYADSW ISQSISDVHL QFTESWIKAH IDDAEKYLGM PVVFAEFGVS 360 TKDPGYNTSF RDTVINTVYK TLLNSTKKGG SGGGSLLWQL FPDGTDYMDD GYAIVLSKAP 420 STSNIIALHS TRLALFNSRC AWKCKWGCRK RSPLEFLYND DQ* |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam12876 | Cellulase-like | 0.0003 | 221 | 316 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. |
| pfam00150 | Cellulase | 8.0e-6 | 222 | 369 | 152 | + Cellulase (glycosyl hydrolase family 5). |
| COG3934 | COG3934 | 3.0e-26 | 109 | 381 | 278 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rh9_A | 0 | 69 | 434 | 6 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzq_A | 0 | 78 | 425 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzo_A | 0 | 78 | 425 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzn_A | 0 | 78 | 425 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
| PDB | 3pzm_A | 0 | 78 | 425 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
