CAZyme Information

Basic Information
SpeciesFragaria vesca
Cazyme IDmrna14019.1-v1.0-hybrid
FamilyGH18
Protein PropertiesLength: 647 Molecular Weight: 72600.5 Isoelectric Point: 6.1416
ChromosomeChromosome/Scaffold: 3 Start: 27672014 End: 27677306
Description
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH184005756.7e-23
  HFLLSFAIDYDTSGSSPTNGNFNVFWDTDNLGASQVSDIKNAHSNVKVGLSLGGDSVNSGSCYFNPSSVDSWVSNAVSSLTSIIQQYNLDGIDIDYEHFQ
  SDPDTFSECIGRLIKTLKDNGVIKFASIAPFDDDDVQSHYLALWKNYGQLIDYVNFQFYAYDQSTTVSQFIDYFKT
Full Sequence
Protein Sequence     Length: 647     Download
MEAFELEVEL CETRLTLVKE TDHSKAKDLK IAMLNMELKH EREIKRQAKD SFKVQIKAKD    60
LKIADLNMEL KHERMKKIKR DWWLWGTVAT ALTIGATSLA YSNPSRSTYH HTSFFVLVGI    120
FDQDLDQSEV VAFLNRLRCD FERVKGDNGV DMSTSPSASM NLSMDSSSGK GKRMVMALLL    180
GNHRLKKKKR LSGVVNGEVC KDVMCEDGRD FVMPMRLNIS QRNIGELKHW RSTASDEDNA    240
QARSPTRIMG SSHLRHLELL EEDCNPGQAR DLKRLNWCCD WRRREGEKSS CRDFTLDAEK    300
WCMHGKGVDP IIEVNTEVNR KLLGVATSDR KKSDDENPVT GKSPATEYRN PVTGEALMIT    360
SNASIKAAPS NSDIFREYIG AEFNDVKFSD VPINPNVEFH FLLSFAIDYD TSGSSPTNGN    420
FNVFWDTDNL GASQVSDIKN AHSNVKVGLS LGGDSVNSGS CYFNPSSVDS WVSNAVSSLT    480
SIIQQYNLDG IDIDYEHFQS DPDTFSECIG RLIKTLKDNG VIKFASIAPF DDDDVQSHYL    540
ALWKNYGQLI DYVNFQFYAY DQSTTVSQFI DYFKTQSSNY NGGKVLASFS TDGSGGLSPE    600
NGFFTACNRL KSEQNLNGIF VWSADDSKKN GFRYEKQSQA LLAIPH* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02871GH18_chitinase_D-like3.0e-9403558170+
smart00636Glyco_181.0e-10400592213+
cd00598GH18_chitinase-like2.0e-15393558174+
pfam00704Glyco_hydro_183.0e-17400560169+
cd06544GH18_narbonin5.0e-137374627255+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B03746422273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A03746422273A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A8.00001e-413746434288A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
PDB3ebv_A0.00838755822181A Chain A, Crystal Structure Of Putative Chitinase A From Streptomyces Coelicolor
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna17899.1-v1.0-hybridmrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny