CAZyme Information

Basic Information
SpeciesFragaria vesca
Cazyme IDmrna14034.1-v1.0-hybrid
FamilyGH18
Protein PropertiesLength: 318 Molecular Weight: 35684 Isoelectric Point: 7.6744
ChromosomeChromosome/Scaffold: 3 Start: 27763358 End: 27764311
Description
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18612482e-21
  ILSFAIDYTTSSHPNCTNNFTTSSHPKPTNGNFNVFWDTKNLSPSHVSAIKASHPNAKVALSLGGDTVKGNQYAYFSPTSINSWVRNAIASIVQITKEYE
  LDGIDIDCEHFQTDPNTFAECIGRLLFHLKQNNVVSFTSIAPYEDDSVQPYYLALWRKYGHLIDYVNFQFYAYSKGTTVTQFMKYFET
Full Sequence
Protein Sequence     Length: 318     Download
MNSTRLQLFL FLLMTLFFTT LSTAQAAPAY SKLFREYIGA EDNGVRFTDV PIDSRVEFHF    60
ILSFAIDYTT SSHPNCTNNF TTSSHPKPTN GNFNVFWDTK NLSPSHVSAI KASHPNAKVA    120
LSLGGDTVKG NQYAYFSPTS INSWVRNAIA SIVQITKEYE LDGIDIDCEH FQTDPNTFAE    180
CIGRLLFHLK QNNVVSFTSI APYEDDSVQP YYLALWRKYG HLIDYVNFQF YAYSKGTTVT    240
QFMKYFETQS SNYKGGKILV SIGTDNSGGL SPKNGFFEAC ARLKSQGKLH GIFIWSADDS    300
KKASFHHENQ SQRFLAS* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd06548GH18_chitinase5.0e-510917063+
smart00636Glyco_189.0e-890231157+
cd00598GH18_chitinase-like2.0e-1159231178+
pfam00704Glyco_hydro_183.0e-1259240188+
cd06544GH18_narbonin2.0e-11533300269+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B0333172275A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A0333172275A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A7e-31333004266A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
26
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna17899.1-v1.0-hybridmrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny