Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna14930.1-v1.0-hybrid |
Family | GT4 |
Protein Properties | Length: 471 Molecular Weight: 52453.3 Isoelectric Point: 10.1423 |
Chromosome | Chromosome/Scaffold: 1 Start: 8343783 End: 8346511 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT4 | 269 | 433 | 5.8e-22 |
DLLFAIINSVSRGKGQDLFLRSFYESVKLVQEKKLQLPKMHAVVVGSDMTAHTKFESELRNFVKMKKIEDRVHFVNKTLTVAPYLAAIDVLVQNSQARGE CFGRITIEAMAFQLPVLGTAAGGTTEIVVNGTTGLLHPVGKEGVTPLAKNIVKLATHVERRLTMG |
Full Sequence |
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Protein Sequence Length: 471 Download |
MAKQQHSAGW GASQKRWLLA FLVMLSVSTL IAFFIRAAFD SCDRNLDVVG KRVPLGSPIG 60 TSPSPLTFMK SKLVLLVSHE LSLSGGPLLL MELAFLLRSV GTEVCWVTIQ RPVHSDEVTY 120 SLENKMLDRG VQVLSEKGQE STNIALKADL IVLNTAVAGK WMELDATLKE NVPHLLPKVL 180 WWIHEMRGHY FKLDYVKHLP AVAGAMIDSH VTAEYWKNRT RERLGIKMPE TFVVHLGNSK 240 ELMEVAEDTV AKRVLREHVR ESLGVRSEDL LFAIINSVSR GKGQDLFLRS FYESVKLVQE 300 KKLQLPKMHA VVVGSDMTAH TKFESELRNF VKMKKIEDRV HFVNKTLTVA PYLAAIDVLV 360 QNSQARGECF GRITIEAMAF QLPVLGTAAG GTTEIVVNGT TGLLHPVGKE GVTPLAKNIV 420 KLATHVERRL TMGKRGYERV KERFLEHHMA NRVSGVLKAV LQKSKSHSDA * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03800 | GT1_Sucrose_synthase | 2.0e-17 | 274 | 444 | 177 | + This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. | ||
COG0438 | RfaG | 3.0e-19 | 113 | 464 | 378 | + Glycosyltransferase [Cell envelope biogenesis, outer membrane] | ||
cd03798 | GT1_wlbH_like | 2.0e-19 | 282 | 460 | 183 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
cd03808 | GT1_cap1E_like | 4.0e-23 | 282 | 453 | 173 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
cd03801 | GT1_YqgM_like | 1.0e-29 | 143 | 458 | 320 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jjm_L | 0.0000000000007 | 329 | 466 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_K | 0.0000000000007 | 329 | 466 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_J | 0.0000000000007 | 329 | 466 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_I | 0.0000000000007 | 329 | 466 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |
PDB | 2jjm_H | 0.0000000000007 | 329 | 466 | 258 | 391 | A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. |