Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna15177.1-v1.0-hybrid |
Family | GH5 |
Protein Properties | Length: 434 Molecular Weight: 49010.9 Isoelectric Point: 6.8904 |
Chromosome | Chromosome/Scaffold: 2 Start: 22430704 End: 22432675 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 41 | 363 | 1.5e-33 |
NGTPYYANGFNAYWLMYMASDPSQRNLVSSAFQQASKNGLTIARTWAFNDGDYRALQYSPGSYNEQSFQGLDFVVSEARKYGIKLVLSLVNSYENFGGRK QYVEWARSQGHQSINSEDDFFTNSVVKGYYKNHIKTVLTRRNSLTGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWITEMASYLKSIDGNHLLEAGLE GFYGESKQQTNPKDFQVGTDFIANNQIPGIDFATVHSYPDQWLTGSNYEDQVSFLSSWVNDHIQDAQNILHKPVLFAEFGRSLKESGYTTSQRDQIFNTL YSAIYSSARGGGAAVGGLFWQLL |
Full Sequence |
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Protein Sequence Length: 434 Download |
MKSCGLLFFA LLLLQYHGVL VQQVEAEDDF VKTKGVQFML NGTPYYANGF NAYWLMYMAS 60 DPSQRNLVSS AFQQASKNGL TIARTWAFND GDYRALQYSP GSYNEQSFQG LDFVVSEARK 120 YGIKLVLSLV NSYENFGGRK QYVEWARSQG HQSINSEDDF FTNSVVKGYY KNHIKTVLTR 180 RNSLTGVAYK DEPTIMAWEL MNEPRCTSDP SGRTIQAWIT EMASYLKSID GNHLLEAGLE 240 GFYGESKQQT NPKDFQVGTD FIANNQIPGI DFATVHSYPD QWLTGSNYED QVSFLSSWVN 300 DHIQDAQNIL HKPVLFAEFG RSLKESGYTT SQRDQIFNTL YSAIYSSARG GGAAVGGLFW 360 QLLAEGMDSF QDGYGVVLSE SSSTVGIIAE ESQRLIKIRK MYARLRNIEK WKRARDIRRA 420 QWWSGNKVKD TGN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2730 | BglC | 0.005 | 72 | 205 | 138 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
pfam00150 | Cellulase | 0.0001 | 100 | 332 | 243 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 8.0e-28 | 38 | 411 | 375 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 26 | 398 | 2 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 39 | 374 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 39 | 374 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 39 | 374 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 39 | 374 | 21 | 356 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |