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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna15199.1-v1.0-hybrid |
Family | AA2 |
Protein Properties | Length: 927 Molecular Weight: 101369 Isoelectric Point: 8.1124 |
Chromosome | Chromosome/Scaffold: 2 Start: 22534637 End: 22540734 |
Description | GTP-binding protein, HflX |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA2 | 653 | 907 | 0 |
NNPRVAASLLRLHFHDCFVQGCDASVLLDDSATISSEKNSGPNKNSLRGFEVIDEIKAKLEEACPQTVSCADILALSARGSTSGGPNWVLPLGRRDSTTA SLTGSNRNIPAPNSTLPTLLNFFQRQGLDEVDLVALSGGHTIGIARCVTFRQRLYNQNGNNQPDSTLERSYLFGLKSVCPSSGGDNNISPLDLSSPARFD NSYFKLILLGKGLLTSDQVLLTGNVGKTMDLVKSFSDDEGLFFQHFAKSMVKMGN |
Full Sequence |
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Protein Sequence Length: 927 Download |
MSASLCCSLI RSSPLLHHEP YLSWPLAKLN HRQIWSLTLR NHPPASARVV ARAVADGGVG 60 VVSPDDLSFE DVAAIETDEV GNGEVEGVVA ESKSEDKGLR PTTKYKKKKK EEEDGLENRF 120 KLRNGKEIFE EKAYIVGVEH KRNSTDLFGV EESLKELTQL ADTAGLMVVG STYQKLASPN 180 SRTYIGSGKV AEIKSAIHAL GVETVIFDDE LSAGQLRNLE KAFGGDVRVC DRTALILDIF 240 NQRAATHEAA LQVALAQMEY QLPRLTKMWT HLERQSGGQV KGMGEKQIEV DKRILRTQIG 300 VLKKELESVR KHRKQYRNQR LSVPVPVVSL VGYTNAGKST LLNQLTGANV LAEDQLFATL 360 DPTTRRVQMK NGMEFLLTDT VGFIQKLPTT VVAAFRATLE EISESALLVH VVDISHPLAE 420 QQIEAVDRVL SELDVSSIPR LMVWNKVDKV SNPDSIRIEA EKRDDVVCIS ALSGEGLNEF 480 CSAIQEKLKD SMVWVEALIP FEKGELLSAI HKVGMVKKTL HAVRFKVEAI PVLYVQHWHF 540 PRGRGNTRKA AQEIVFALVI HISLEKYSMA VFKVTCVALV AVTLLYLVTL GVAHPVGFNF 600 GWGWGSHGGN GGHGGHSGNG GGGYSGLSPE YYQFSCPQAN DIVMSVLHKA IANNPRVAAS 660 LLRLHFHDCF VQGCDASVLL DDSATISSEK NSGPNKNSLR GFEVIDEIKA KLEEACPQTV 720 SCADILALSA RGSTSGGPNW VLPLGRRDST TASLTGSNRN IPAPNSTLPT LLNFFQRQGL 780 DEVDLVALSG GHTIGIARCV TFRQRLYNQN GNNQPDSTLE RSYLFGLKSV CPSSGGDNNI 840 SPLDLSSPAR FDNSYFKLIL LGKGLLTSDQ VLLTGNVGKT MDLVKSFSDD EGLFFQHFAK 900 SMVKMGNIRP LTGLKGQVRK NCRRVN* 960 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd01878 | HflX | 8.0e-99 | 285 | 488 | 204 | + HflX GTPase family. HflX subfamily. A distinct conserved domain with a glycine-rich segment N-terminal of the GTPase domain characterizes the HflX subfamily. The E. coli HflX has been implicated in the control of the lambda cII repressor proteolysis, but the actual biological functions of these GTPases remain unclear. HflX is widespread, but not universally represented in all three superkingdoms. | ||
PRK11058 | PRK11058 | 6.0e-99 | 152 | 518 | 373 | + GTPase HflX; Provisional | ||
COG2262 | HflX | 3.0e-152 | 130 | 534 | 408 | + GTPases [General function prediction only] | ||
cd00693 | secretory_peroxidase | 6.0e-161 | 627 | 925 | 301 | + Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites. | ||
TIGR03156 | GTP_HflX | 1.0e-166 | 132 | 488 | 358 | + GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like) [Unknown function, General]. |
Gene Ontology | |
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GO Term | Description |
GO:0004601 | peroxidase activity |
GO:0005525 | GTP binding |
GO:0005622 | intracellular |
GO:0006979 | response to oxidative stress |
GO:0015093 | ferrous iron transmembrane transporter activity |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qo4_A | 0 | 627 | 926 | 3 | 304 | A Chain A, Crystal Structure Of Catechol 2,3-Dioxygenase |
PDB | 1pa2_A | 0 | 627 | 926 | 3 | 304 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1sch_B | 0 | 627 | 926 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1sch_A | 0 | 627 | 926 | 2 | 294 | A Chain A, Peanut Peroxidase |
PDB | 1fhf_C | 0 | 627 | 926 | 2 | 303 | A Chain A, The Structure Of Soybean Peroxidase |
Sequence Alignments (This image is cropped. Click for full image.) |
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