Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna15382.1-v1.0-hybrid |
Family | AA7 |
Protein Properties | Length: 521 Molecular Weight: 57491.9 Isoelectric Point: 4.7798 |
Chromosome | Chromosome/Scaffold: 6 Start: 13589413 End: 13592701 |
Description | cytokinin oxidase 7 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA7 | 52 | 247 | 5.7e-32 |
GMNSLAPLALVRPAGAADVASVVRAAANLNLTAAARGNGHSINGQAMADRGLVLDMPAMEDHFQVVRTSSTSGYADVSGGALWEDVLKRCVRDYGMAPRS WTDYLSLTVGGTLSNAGVSGQAFRYGPQTSNVTELEVVTGKGETFVCSEEENSELFFSVLGGLGQFGIITRARVRLQQAPDMVRWIRLVYTEFDAF |
Full Sequence |
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Protein Sequence Length: 521 Download |
MIAYLECFVQ ENENDAESRP YDVVSGLRGA LDLQGTIDCG DAAEQAAKDF GGMNSLAPLA 60 LVRPAGAADV ASVVRAAANL NLTAAARGNG HSINGQAMAD RGLVLDMPAM EDHFQVVRTS 120 STSGYADVSG GALWEDVLKR CVRDYGMAPR SWTDYLSLTV GGTLSNAGVS GQAFRYGPQT 180 SNVTELEVVT GKGETFVCSE EENSELFFSV LGGLGQFGII TRARVRLQQA PDMVRWIRLV 240 YTEFDAFTRD AESLVTRPHD DGESFDYVEG FAFMNSDNPA DGLPSVPLHP DQVFDPTRLP 300 QEAGSVLYCL ELARHYRSSD HLSAVDKGVN RLLEGLGFVE GLEFQVDLGY EEFLLRVKQA 360 EEHAKASGIW DAPHPWLNLF VSKSDIADFD RVVFKEILKD GIGGPMLVYP LLCSKWDART 420 SVVLPEGEIF YIVALLRFTP AYPKGPSCES LVAQNQEIVQ YCRKKGLDFK LYLPHYRSQE 480 EWKRHFGNQW SRFVERKTCF DPMAILAPGQ KIFPRSNPKP * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR01678 | FAD_lactone_ox | 0.0001 | 88 | 234 | 147 | + sugar 1,4-lactone oxidases. This model represents a family of at least two different sugar 1,4 lactone oxidases, both involved in synthesizing ascorbic acid or a derivative. These include L-gulonolactone oxidase (EC 1.1.3.8) from rat and D-arabinono-1,4-lactone oxidase (EC 1.1.3.37) from Saccharomyces cerevisiae. Members are proposed to have the cofactor FAD covalently bound at a site specified by Prosite motif PS00862; OX2_COVAL_FAD; 1. | ||
COG0277 | GlcD | 2.0e-20 | 57 | 515 | 468 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
pfam01565 | FAD_binding_4 | 1.0e-21 | 58 | 199 | 142 | + FAD binding domain. This family consists of various enzymes that use FAD as a co-factor, most of the enzymes are similar to oxygen oxidoreductase. One of the enzymes Vanillyl-alcohol oxidase (VAO) has a solved structure, the alignment includes the FAD binding site, called the PP-loop, between residues 99-110. The FAD molecule is covalently bound in the known structure, however the residue that links to the FAD is not in the alignment. VAO catalyzes the oxidation of a wide variety of substrates, ranging form aromatic amines to 4-alkylphenols. Other members of this family include D-lactate dehydrogenase, this enzyme catalyzes the conversion of D-lactate to pyruvate using FAD as a co-factor; mitomycin radical oxidase, this enzyme oxidises the reduced form of mitomycins and is involved in mitomycin resistance. This family includes MurB an UDP-N-acetylenolpyruvoylglucosamine reductase enzyme EC:1.1.1.158. This enzyme is involved in the biosynthesis of peptidoglycan. | ||
pfam09265 | Cytokin-bind | 4.0e-121 | 231 | 513 | 284 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
PLN02441 | PLN02441 | 0 | 1 | 518 | 524 | + cytokinin dehydrogenase |
Gene Ontology | |
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GO Term | Description |
GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
GO:0009690 | cytokinin metabolic process |
GO:0016491 | oxidoreductase activity |
GO:0019139 | cytokinin dehydrogenase activity |
GO:0050660 | flavin adenine dinucleotide binding |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2q4w_A | 0 | 2 | 516 | 2 | 523 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 2exr_A | 0 | 2 | 516 | 2 | 523 | A Chain A, X-Ray Structure Of Cytokinin OxidaseDEHYDROGENASE (CKX) FROM Arabidopsis Thaliana At5g21482 |
PDB | 3s1d_A | 0 | 30 | 513 | 22 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3s1c_A | 0 | 30 | 513 | 22 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3dq0_A | 0 | 30 | 513 | 22 | 515 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
Sequence Alignments (This image is cropped. Click for full image.) |
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