| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna15488.1-v1.0-hybrid |
| Family | GH9 |
| Protein Properties | Length: 941 Molecular Weight: 103957 Isoelectric Point: 7.9491 |
| Chromosome | Chromosome/Scaffold: 6 Start: 13519245 End: 13525756 |
| Description | glycosyl hydrolase 9A4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH9 | 486 | 932 | 0 |
| DYKDALTKSIIFLEAQRSGKLPPNHRPKWRGDSALDDGKLANVDLAGGYYDAGDNVKYGLPMAFTVTTLAWAAIQYQSELKATGELQNVIDGIKWGTDYF LKASRKKTLYVQVGDPNADHQCWVRPEDMKTPRTVLKIDENTPGSEIAGETSAAMAAASIVFRPFDRAYARRLLNKAKLLFQMAKLHKGTYDGECPFYCS FSGYNDELFWAATWLYKATKRPEYLTYIHEEAITATVAEFSWDLKYAGAQILVSKMFFEGDKTLENFKNQADSFICSNIPESPYAQVKTTPGGMIHLRDG ANTQYVTGAALLFSIYSDFLAEHNQKVECSNKQFDSTHLMAFAKKQIDLLLGDNPNGRSYMVGFGQNAPTQAHHRGASIPVGTDSSNVNCPMSFVYWYNK DVPNPNELTGAILGGPDINDQFHDKRWESVFTEPCTYVNSQAVGVLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 941 Download |
| MKNSWFGLGD FDDGSSYNFP LEPLILYSLR GNVFSHISSF RDNSLHHYRY FHGPGSLALE 60 GAFNHVSKFA GALLVMFSSG NSTNATQAIA GNLDGCEPGC SSSSARVKHV TSSRQKFKGF 120 HFSFGPKGES NNPIDFGKIS ASVMQFLQRE AETRYSYSLL SLATALVPPF GNLNFSSLVI 180 PTRSSNMLAV STSNTDIMDQ RPCEVGRQGC AGLPFPNLDW RIHAVEPRTG IEFPMVLDNI 240 LTAGNNSSLN SEVSTSESSV VVGGAVLVGT GSRTMTIIRI KSLKLYAFGF YIHPHSVCKK 300 LGPKYASVSL DELNKRHDFY QDLLREDIDM TVRLVVSCNG MKVNTVRDAF EKSLRARLVK 360 TNPETDFRCI TTFGSKFTQD IPLPAGTTID FQRTADGKLI TKIGDNQIGA VQSKELCRAF 420 FDMYLGDVPV SEQTKEEIGR NVAKARDSAF PSSPRIIYPR TMYVGKPSAI VVVWLALFQG 480 LHAHLDYKDA LTKSIIFLEA QRSGKLPPNH RPKWRGDSAL DDGKLANVDL AGGYYDAGDN 540 VKYGLPMAFT VTTLAWAAIQ YQSELKATGE LQNVIDGIKW GTDYFLKASR KKTLYVQVGD 600 PNADHQCWVR PEDMKTPRTV LKIDENTPGS EIAGETSAAM AAASIVFRPF DRAYARRLLN 660 KAKLLFQMAK LHKGTYDGEC PFYCSFSGYN DELFWAATWL YKATKRPEYL TYIHEEAITA 720 TVAEFSWDLK YAGAQILVSK MFFEGDKTLE NFKNQADSFI CSNIPESPYA QVKTTPGGMI 780 HLRDGANTQY VTGAALLFSI YSDFLAEHNQ KVECSNKQFD STHLMAFAKK QIDLLLGDNP 840 NGRSYMVGFG QNAPTQAHHR GASIPVGTDS SNVNCPMSFV YWYNKDVPNP NELTGAILGG 900 PDINDQFHDK RWESVFTEPC TYVNSQAVGV LAKLATKSIA * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| pfam00759 | Glyco_hydro_9 | 2.0e-169 | 486 | 932 | 464 | + Glycosyl hydrolase family 9. |
| PLN02266 | PLN02266 | 1.0e-172 | 480 | 935 | 468 | + endoglucanase |
| PLN02909 | PLN02909 | 0 | 469 | 937 | 474 | + Endoglucanase |
| PLN03175 | PLN03175 | 0 | 10 | 443 | 439 | + hypothetical protein; Provisional |
| PLN02613 | PLN02613 | 0 | 470 | 934 | 471 | + endoglucanase |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016872 | intramolecular lyase activity |
| GO:0042398 | cellular modified amino acid biosynthetic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ksd_A | 0 | 486 | 934 | 4 | 428 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1ksc_A | 0 | 486 | 934 | 4 | 428 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
| PDB | 1ks8_A | 0 | 486 | 934 | 4 | 428 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
| PDB | 2xfg_A | 0 | 485 | 934 | 24 | 459 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 4tf4_B | 0 | 485 | 937 | 4 | 443 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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