| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna15637.1-v1.0-hybrid |
| Family | GT41 |
| Protein Properties | Length: 1031 Molecular Weight: 114406 Isoelectric Point: 6.6937 |
| Chromosome | Chromosome/Scaffold: 6 Start: 14628705 End: 14637021 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT41 | 479 | 979 | 0 |
| SIKPNFSQSLNNLGVVYTVQGKMDGAASMIEKAIIANPTYAEAYNNLGVLYRDAGNITMAIDAYEQCLKIDPDSRNAGQNRLLAMNYIHEGHDDKLFVAH RDWGRRFMRLFSQYTSWDNIKDPERPLVIGYVSPDYFTHSVSYFIEAPLAHHEYAKYKVVVYSAVVKADAKTIRFRERVLKKGGIWRDIYGIDEKKVASI IKEDKVDILVELTGHTANNKLGTMACRPAPVQVTWIGYPNTTGLPAIDYRITDSLADSTDSEQKHVEELVRLPECFLCYTPSPEAGPVSPTPALSNGFIT FGSFNNLAKITPKVLQVWARILSAIPNSRLVVKCKPFSCDSVRERFLSTLEQLGLEPLRVDLLPLILLNYDHMQAYSLMDISLDTFPYAGTTTTCESLYM GVPCVTMGGSVHAHNVGVSILSKVGLGNLIAKNEEEYVQLAVQLASDITALSNLRMSLRDLMSRSPVCDGPKFTLGLESAYRNMWRRYCKGDVPSKRHME M | |||
| Full Sequence |
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| Protein Sequence Length: 1031 Download |
| MAWTDKDVCN GKDADPVVEN GFLNCSEPSP STSGSLAGAT AERKSFEVKE TISYANILRS 60 RNKFSDALSL YETVLEKDAG NVEAHIGKGI CLQMKNMGRV AFDSFMEAIK LDPENACALT 120 HCGILYKDEG RLREAAESYQ KALKADPSYK PAAECLAIVL TDLGTSLKLA GNTQDGLQKY 180 YEALKTDPHY APAYYNLGVV YSEMMQFDTA LTCYEKAALE RPMYAEAYCN MGVIYKNRGD 240 LESAIACYER CLAVSPNFEI AKNNMAIALT DLGTKARCGA DVHTEEKVRT SLRSPQSGAD 300 DAASSPERTP AASPITFSCR RDRFEGLGSN LHPKLQTRSI TPANWNSADS LGRESDRGRL 360 WCPLGQRRAV IGAGRRRMER RLHFFFGADV RSSSFLCVKL EGDIDQGIAY YKKALYYNWH 420 YADAMYNLGV AYGEMLKFDM AIVFYELAFH FNPHCAEACN NLGVIYKDRD NLDKALALSI 480 KPNFSQSLNN LGVVYTVQGK MDGAASMIEK AIIANPTYAE AYNNLGVLYR DAGNITMAID 540 AYEQCLKIDP DSRNAGQNRL LAMNYIHEGH DDKLFVAHRD WGRRFMRLFS QYTSWDNIKD 600 PERPLVIGYV SPDYFTHSVS YFIEAPLAHH EYAKYKVVVY SAVVKADAKT IRFRERVLKK 660 GGIWRDIYGI DEKKVASIIK EDKVDILVEL TGHTANNKLG TMACRPAPVQ VTWIGYPNTT 720 GLPAIDYRIT DSLADSTDSE QKHVEELVRL PECFLCYTPS PEAGPVSPTP ALSNGFITFG 780 SFNNLAKITP KVLQVWARIL SAIPNSRLVV KCKPFSCDSV RERFLSTLEQ LGLEPLRVDL 840 LPLILLNYDH MQAYSLMDIS LDTFPYAGTT TTCESLYMGV PCVTMGGSVH AHNVGVSILS 900 KVGLGNLIAK NEEEYVQLAV QLASDITALS NLRMSLRDLM SRSPVCDGPK FTLGLESAYR 960 NMWRRYCKGD VPSKRHMEML QQEVSPEEPG TKIAEPIRIT ASGSFTSIKS NGFTPSTPMP 1020 NLCSSEENGV * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13844 | Glyco_transf_41 | 3.0e-14 | 605 | 754 | 153 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| cd00189 | TPR | 2.0e-21 | 159 | 257 | 99 | + Tetratricopeptide repeat domain; typically contains 34 amino acids [WLF]-X(2)-[LIM]-[GAS]-X(2)-[YLF]-X(8)-[ASE]-X(3)-[FYL]-X(2)-[ASL]-X(4)-[PKE] is the consensus sequence; found in a variety of organisms including bacteria, cyanobacteria, yeast, fungi, plants, and humans in various subcellular locations; involved in a variety of functions including protein-protein interactions, but common features in the interaction partners have not been defined; involved in chaperone, cell-cycle, transciption, and protein transport complexes; the number of TPR motifs varies among proteins (1,3-11,13 15,16,19); 5-6 tandem repeats generate a right-handed helical structure with an amphipathic channel that is thought to accomodate an alpha-helix of a target protein; it has been proposed that TPR proteins preferably interact with WD-40 repeat proteins, but in many instances several TPR-proteins seem to aggregate to multi-protein complexes; examples of TPR-proteins include, Cdc16p, Cdc23p and Cdc27p components of the cyclosome/APC, the Pex5p/Pas10p receptor for peroxisomal targeting signals, the Tom70p co-receptor for mitochondrial targeting signals, Ser/Thr phosphatase 5C and the p110 subunit of O-GlcNAc transferase; three copies of the repeat are present here | ||
| pfam13844 | Glyco_transf_41 | 1.0e-21 | 777 | 963 | 187 | + Glycosyl transferase family 41. This family of glycosyltransferases includes O-linked beta-N-acetylglucosamine (O-GlcNAc) transferase, an enzyme which catalyzes the addition of O-GlcNAc to serine and threonine residues. In addition to its function as an O-GlcNAc transferase, human OGT, also appears to proteolytically cleave the epigenetic cell-cycle regulator HCF-1. | ||
| COG3914 | Spy | 6.0e-81 | 439 | 966 | 561 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4gz6_D | 3e-31 | 421 | 755 | 8 | 386 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 4gz6_D | 2e-23 | 777 | 977 | 524 | 718 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 4gz6_D | 2e-18 | 113 | 269 | 6 | 155 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 4gz6_D | 0.000000000004 | 160 | 289 | 12 | 141 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| PDB | 4gz6_D | 0.00000009 | 55 | 198 | 16 | 152 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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