| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna15657.1-v1.0-hybrid |
| Family | AA3 |
| Protein Properties | Length: 1200 Molecular Weight: 132557 Isoelectric Point: 7.6295 |
| Chromosome | Chromosome/Scaffold: 6 Start: 14756017 End: 14762167 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 11 | 716 | 0 |
| FGHESYDAVVVGSGYGGSVAACRLAMAGVRVCLLEKGRKWEAQDFPTDTFKTLSAVRLENQNLGVSYGPKDALFQMYEQNDSLAAVACGLGGGSLVNAGV MMPAPVRARRHPKWPKEWERNWGSCEASAADMLRIQSIPVKFPSAKILEEAADGETLDTSIKLSINFDIEEPTANGTKRPQMGSCLACGNCLSGCSYNAK SSTDKNYLVSAIQACFKSFYLLSNISINISSAIMSPEVVQAGCIVKTECQVQYVVRNMHDYFQHKGKSGRRWLVYLNEIDYITSDFVILSAGVFGTTEIL FQSQMRGLKLSEALGSGFSCNGNTVAYLAGTPAPVNGFGLDRKQVFTTPFEERPGPSISSSYTSSLGFTIQMIMSQVNSHQRQNQEIQVRGADIKESAVL PIAYPYLLFKGIVTYGWPTGYWFLHGIIDKIGHIIGSKASQAMILIAVGHDESDGKIMLEKGTNKICFTPPQDPLLPRKIKAFQKLTKKLGGLLFMSKYR STAVHLLGGCNVSSDPSGGVCNPNGQVFEPESSTAVHPGLYVCDASLIPCSVGINPSLTITTVAEHISKNLVQEALKYKSSNGVESVVKIANRGQESFNE KNFINRQSSTVMVKETMRGYVGGMPCTAYLKMRMNSQDQSCSDVKLDTAKSHPLLRGKVGGHVEIRALDKDDLHIIDGNVNLCVVDDRTPYTQYMKYDLL LAASTG | |||
| Full Sequence |
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| Protein Sequence Length: 1200 Download |
| MEEQAEVDES FGHESYDAVV VGSGYGGSVA ACRLAMAGVR VCLLEKGRKW EAQDFPTDTF 60 KTLSAVRLEN QNLGVSYGPK DALFQMYEQN DSLAAVACGL GGGSLVNAGV MMPAPVRARR 120 HPKWPKEWER NWGSCEASAA DMLRIQSIPV KFPSAKILEE AADGETLDTS IKLSINFDIE 180 EPTANGTKRP QMGSCLACGN CLSGCSYNAK SSTDKNYLVS AIQACFKSFY LLSNISINIS 240 SAIMSPEVVQ AGCIVKTECQ VQYVVRNMHD YFQHKGKSGR RWLVYLNEID YITSDFVILS 300 AGVFGTTEIL FQSQMRGLKL SEALGSGFSC NGNTVAYLAG TPAPVNGFGL DRKQVFTTPF 360 EERPGPSISS SYTSSLGFTI QMIMSQVNSH QRQNQEIQVR GADIKESAVL PIAYPYLLFK 420 GIVTYGWPTG YWFLHGIIDK IGHIIGSKAS QAMILIAVGH DESDGKIMLE KGTNKICFTP 480 PQDPLLPRKI KAFQKLTKKL GGLLFMSKYR STAVHLLGGC NVSSDPSGGV CNPNGQVFEP 540 ESSTAVHPGL YVCDASLIPC SVGINPSLTI TTVAEHISKN LVQEALKYKS SNGVESVVKI 600 ANRGQESFNE KNFINRQSST VMVKETMRGY VGGMPCTAYL KMRMNSQDQS CSDVKLDTAK 660 SHPLLRGKVG GHVEIRALDK DDLHIIDGNV NLCVVDDRTP YTQYMKYDLL LAASTGSREM 720 TTLHVTFEKV SGEDSKDEKE VLKGELHISI TELLKSIISL KGNNRGRFMC LLSGSFFRTY 780 FLPVPRGNQG DLVLSEDKSY PSSTLHEIKA EDGFTISCRQ WKSKLEGDLK LNPVLLLNAY 840 AIESFWLPTE PNDLVRTLIE EGHETWLLNS RLHPLNPSND FTIEDVGKFD IPAAINKILE 900 LHGPSTKVHV VAHCVGGSAI HIAIMGGHVS ATRIASLSCT NSSMFFKLNA MSTFKMWLPL 960 IPLSMFILGK DKTLPLLETS NISSRHRLLK LIASFIPRTE RCTCFECEVF SGVFGNAFWH 1020 ENITPTLHQW LTKQNATRLP MAAFPHLRKM SNSGFIVDSN GCNSYLIHPE RMTLPTLYIS 1080 GGRSLLVTPQ TSFLAHKYMK LHQPGFRHER VVVEGFGHSD LLIGEESHTK VFPHILSHIR 1140 LAEQGEVHAK GKKYSKEALD REDDQYYEGN FGIFGTWFSP FVVIMLLFIL LSWLVAVFF* 1200 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0596 | MhpC | 0.009 | 833 | 1118 | 286 | + Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | ||
| pfam00732 | GMC_oxred_N | 0.0002 | 99 | 224 | 129 | + GMC oxidoreductase. This family of proteins bind FAD as a cofactor. | ||
| COG2303 | BetA | 6.0e-11 | 460 | 585 | 128 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| pfam05199 | GMC_oxred_C | 7.0e-14 | 505 | 577 | 73 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.00001 | 18 | 333 | 14 | 323 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
| PDB | 3cox_A | 0.00005 | 454 | 576 | 375 | 496 | A Chain A, Structure Of An Esterase From The Oil-Degrading Bacterium Oleispira Antarctica |
| PDB | 1coy_A | 0.00001 | 18 | 333 | 14 | 323 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1coy_A | 0.00005 | 454 | 576 | 375 | 496 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1hlg_B | 0.00004 | 800 | 966 | 17 | 195 | A Chain A, Crystal Structure Of Human Gastric Lipase |
| Transmembrane Domains | |
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| Start | End |
| 1176 | 1198 |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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