| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna15659.1-v1.0-hybrid |
| Family | AA3 |
| Protein Properties | Length: 1115 Molecular Weight: 124199 Isoelectric Point: 8.3525 |
| Chromosome | Chromosome/Scaffold: 6 Start: 14774613 End: 14780280 |
| Description | Long-chain fatty alcohol dehydrogenase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA3 | 16 | 675 | 0 |
| QEDSYDAVVVGSGYGGSVAACRLSMAGVRVCLIEKGRKWESQDFPTDVSKILSAFRMENQNLGLSFGPKDALFQVYEQNDSLAAVACGLGGGSLINAGVM IPTPVRARCHPKWPKEWERNWDNCEASATAMLKIQSTPVKFPSAKTLEEVAYGELGETFEMSMKLSVNFDIEEPITKGMKPPQMSSCLACGNCLSGCPYN AKSSTDKNYILSAIQEGCIVKTECQVKYVVRNLYENFPCERKIVRKNRRWRVYFNEIDYITSDFVILSAGVFGTTEILFQSQMRGLKLSEALGSGFSCNG NTVAYLAGSPAPLGAYGLDRKQMFKTPFEKRPGPSITSSYTSSLGFTIQSAVLPTAYPYLLFKGITTYGWPAGYWFFHGIIDKIKHIIGFKACQSMVLIA LGHDESDGKITLEKGTNKICFTPPHDPLLPRKIKAFQRLTKKLGGFLFMAKYRSASVHLLGGCNASSDPSHGVCNPDGQVFDPKSPATIHPGLYVCDASL IPCSVGINPSLTIATVAEHVSRNLVQDVLMYKSREGLECVLKTPNQDTESFIDRKAINGQRSLVTIRETMRGYIGGMPCTAYLIMKMNSQGQTGSPKWKL GNGESHPLLRGKVGGHVEMISFEKDKLHILDGNVNLCAVDDRTPYTQYMHYRLLLAASTG | |||
| Full Sequence |
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| Protein Sequence Length: 1115 Download |
| MVEKQAAVEE SFGDGQEDSY DAVVVGSGYG GSVAACRLSM AGVRVCLIEK GRKWESQDFP 60 TDVSKILSAF RMENQNLGLS FGPKDALFQV YEQNDSLAAV ACGLGGGSLI NAGVMIPTPV 120 RARCHPKWPK EWERNWDNCE ASATAMLKIQ STPVKFPSAK TLEEVAYGEL GETFEMSMKL 180 SVNFDIEEPI TKGMKPPQMS SCLACGNCLS GCPYNAKSST DKNYILSAIQ EGCIVKTECQ 240 VKYVVRNLYE NFPCERKIVR KNRRWRVYFN EIDYITSDFV ILSAGVFGTT EILFQSQMRG 300 LKLSEALGSG FSCNGNTVAY LAGSPAPLGA YGLDRKQMFK TPFEKRPGPS ITSSYTSSLG 360 FTIQSAVLPT AYPYLLFKGI TTYGWPAGYW FFHGIIDKIK HIIGFKACQS MVLIALGHDE 420 SDGKITLEKG TNKICFTPPH DPLLPRKIKA FQRLTKKLGG FLFMAKYRSA SVHLLGGCNA 480 SSDPSHGVCN PDGQVFDPKS PATIHPGLYV CDASLIPCSV GINPSLTIAT VAEHVSRNLV 540 QDVLMYKSRE GLECVLKTPN QDTESFIDRK AINGQRSLVT IRETMRGYIG GMPCTAYLIM 600 KMNSQGQTGS PKWKLGNGES HPLLRGKVGG HVEMISFEKD KLHILDGNVN LCAVDDRTPY 660 TQYMHYRLLL AASTGSREMT TLYVTFAKVA ERNSKEEKTI LKGELNISMT ELLKSTISLK 720 EDGFIISCKQ WKPHHILSKL KRDEHQNPVL LLNGYSTESY WLPTEANDLV RYLLEEGHDA 780 WLLQPRFHPL NPSNNFTIED VARFDIPAAI NKILELHGPR AKVHVVAHCV GGLAIHMAVM 840 GGHVSATHVA SLSCTNSSMF FKLNAFSRVK MWLPLIPISM FILGEDKTVP LLEISKLTSR 900 HHLLRRIARF IPRYERCTCN ECVVFSGMFG NTFWHENVTP SMHQWLNKQS STRLPMSAFP 960 HLRKICNSGF IVDCNGCNSY LIHPERMALP TLYISGGRSL LVTPQTSFLA HKYMKLHQPG 1020 FRHERVVVEG FGHSDLLIGE ESHKKVFPHI LSHIRLADEG EIYTNRNRCS KEALDWEADQ 1080 HYEGSFGPWG TWFSPFVVVS LFIMLVSLLI LLVL* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3243 | PhaC | 0.0004 | 745 | 833 | 93 | + Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism] | ||
| COG0596 | MhpC | 0.0002 | 748 | 1033 | 288 | + Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only] | ||
| TIGR01838 | PHA_synth_I | 9.0e-5 | 745 | 853 | 115 | + poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell [Fatty acid and phospholipid metabolism, Biosynthesis]. | ||
| pfam05199 | GMC_oxred_C | 2.0e-13 | 463 | 534 | 72 | + GMC oxidoreductase. This domain found associated with pfam00732. | ||
| COG2303 | BetA | 6.0e-19 | 37 | 542 | 582 | + Choline dehydrogenase and related flavoproteins [Amino acid transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3cox_A | 0.0000000001 | 7 | 534 | 1 | 496 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 1coy_A | 0.0000000001 | 7 | 534 | 1 | 496 | A Chain A, Crystal Structure Of Cholesterol Oxidase Complexed With A Steroid Substrate. Implications For Fad Dependent Alcohol Oxidases |
| PDB | 1b8s_A | 0.0000000003 | 22 | 543 | 8 | 501 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| PDB | 3gyj_A | 0.00003 | 22 | 316 | 8 | 318 | A Chain A, Cholesterol Oxidase From Streptomyces Glu361gln Mutant |
| Transmembrane Domains | |
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| Start | End |
| 1091 | 1113 |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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