| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna16004.1-v1.0-hybrid |
| Family | GH3 |
| Protein Properties | Length: 975 Molecular Weight: 107824 Isoelectric Point: 7.1737 |
| Chromosome | Chromosome/Scaffold: 5 Start: 14899904 End: 14911714 |
| Description | beta-D-xylosidase 4 |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH3 | 86 | 336 | 0 |
| NVSRLGIPTYQWWSEALHGVSKVGRGGTKFTELVPGATSFPQPILTAASFNNSLFEAIGRVVSTEARAMYNVGLAGLTYWAPNINIFRDPRWGRGQETPG EDPLLTSNYGAGYVRGLQQTDSQDKNRLKVAACCKHYTAYDLDHWKGYDRYTFNAVVTQQDMEDTFQPPLKSCVLEGNAASVMCSYQQVNGKPTCADPDL LSGVIRGEWNLNGYIVTDCDSIDVYYNYQHYTKTPEEAAAMGILAGVDLDC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 975 Download |
| MASPVLCSPV QNRALLWFCF TICYILLCLC SVSSVSGQSY ACGDGFNARS FPFCDKSLAV 60 DARVADLVQR LTLQEKITFL VDAAGNVSRL GIPTYQWWSE ALHGVSKVGR GGTKFTELVP 120 GATSFPQPIL TAASFNNSLF EAIGRVVSTE ARAMYNVGLA GLTYWAPNIN IFRDPRWGRG 180 QETPGEDPLL TSNYGAGYVR GLQQTDSQDK NRLKVAACCK HYTAYDLDHW KGYDRYTFNA 240 VVTQQDMEDT FQPPLKSCVL EGNAASVMCS YQQVNGKPTC ADPDLLSGVI RGEWNLNGYI 300 VTDCDSIDVY YNYQHYTKTP EEAAAMGILA GVDLDCGPYF GMYTEGAVKG GLVTEAAIDK 360 AITNNFGTLM RLGFFDGDPS KQPYGDLGPK DVCTPENQEL ARETARQGIV LLKNSAGSLP 420 LSPTAIKSLA VIGPNGNATD TMIGDYFGIP CKYTSPLQGL TAVVPATFVA GCPDVACGTA 480 QVDDATKLAA AADATVVIVG ENQLIETESH DRTDLYLPGQ QTLLISEVAK ASKGPVILVI 540 MSGGGYDITF AKNDDKITSI LWVGYPGEAG GAAIADVIFG FYNPSGRLPM TWYPQAYVDK 600 VPMNNMNMRP DPASGYPGRT YRFYTGDTVY EFGHGLSYSN FSHRLVQAPK QVSIPLEQDH 660 VCHSSSCQSL DVVEERCQNL AFDIHVGVKN MGKMSGSHTV ILYSSPPSVH NAPKKHLLGF 720 EKVFLSSQKE ALVKFNVDVC KHLSVVDELG NRKVALGDHV LHVGDLKQTL SLFPENAKPK 780 TSLGLRSKDL CVRRFDHLIH TCEKIFIPVH DSDHYFLFVV RLDTEEAEYW DSMHGTNSRR 840 TKCKAILQAL DHIYRNNVFV TSKKKFTEFR LVDRMEAKQS DADCAIFVIR HMQRYGEEWW 900 RNFKSEETRI ELLLYMIKSK YNSLLRMVLK ETVKKEDTKE DNLEKAARMR KVEGKQNTRA 960 RSKKGVNKDV RRSH* 1020 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK15098 | PRK15098 | 1.0e-46 | 61 | 464 | 454 | + beta-D-glucoside glucohydrolase; Provisional | ||
| pfam01915 | Glyco_hydro_3_C | 2.0e-55 | 409 | 639 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
| COG1472 | BglX | 1.0e-55 | 75 | 464 | 399 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
| pfam00933 | Glyco_hydro_3 | 1.0e-62 | 71 | 364 | 302 | + Glycosyl hydrolase family 3 N terminal domain. | ||
| PLN03080 | PLN03080 | 0 | 48 | 772 | 743 | + Probable beta-xylosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0006508 | proteolysis |
| GO:0008234 | cysteine-type peptidase activity |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3u48_B | 0 | 123 | 737 | 91 | 696 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
| PDB | 3u48_A | 0 | 123 | 737 | 91 | 696 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
| PDB | 3u4a_B | 0 | 123 | 737 | 91 | 696 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
| PDB | 3u4a_A | 0 | 123 | 737 | 91 | 696 | A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. |
| PDB | 4i3g_B | 8e-38 | 62 | 462 | 52 | 428 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
