| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna16187.1-v1.0-hybrid |
| Family | AA1 |
| Protein Properties | Length: 813 Molecular Weight: 91019.8 Isoelectric Point: 8.2352 |
| Chromosome | Chromosome/Scaffold: 1 Start: 17388257 End: 17397312 |
| Description | Laccase/Diphenol oxidase family protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| AA1 | 271 | 800 | 0 |
| RYTFVVEDTPYTRLCSTKNILTVNGQFPGPTLYVHKGHTISVEVINRGSRNITLHWHGVAQPRNPWSDGPDYITQCPIQPGAKFTQKIIFSTEEGTLWWH AHSEWDRATVHGAIIIYPSKKSKYPFPKPHAEIPIILGEWWKEDIGKLYTRTIQTGGDPNISDAYLINGQPGDLYPCSKSDTFKVTVDYGKTYLLRLINS AVQEILFFAIANHKVTVVGTDASYTKPFTTDYVTISPGQTMDLLLHANQSPNHYYMAATAYVGGAVPYDNTTTRALLQYTNRGTKGNYTPSSIPLLPNLP AHNDTNASVHFSGSLRSLADKNHPIDVPLKITNHLFFTVSVNTFACPNNSCAGPNGTRLAASVNNISFVNPSIDILQAYYYHVNGAFGTRFPKTPPLLFN FTAQDLPLYLQTPKRGTEVKVLEYDATVELVFQGTNLVAGDDHPMHLHGFSFYVVGMGLGNFDKDKDPLTYNLVDPPLRNTIAVPVNGWTTIRFKADNPG VWFMHCHLDRHMSWGMDMTFIVKNGKDPKA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 813 Download |
| MANNPSSLMP SELIDRCIGS KIWVIMKGDK ELVGTLRGFD VYVNMKYLSD QVVELLSYSQ 60 RNIELVQCKT RQEKVDVGER LILVIISPVS VVLKRRVCIR VFVLSNCFSS LEGCLGNIEH 120 IKLVWRRQDK TMRILESVVN LLNNFTQHFM DSLLCILRLR MSSLSDVDKT RWLLESMQPG 180 VCIRFLAKSN CFSSVEGCVA NVMRAVAIPA NCWCDNEITA EGRRITKLDQ ILLNGNNIAI 240 EVSRISIHLQ LLGLLFAVNG FLLHCQAWPA RYTFVVEDTP YTRLCSTKNI LTVNGQFPGP 300 TLYVHKGHTI SVEVINRGSR NITLHWHGVA QPRNPWSDGP DYITQCPIQP GAKFTQKIIF 360 STEEGTLWWH AHSEWDRATV HGAIIIYPSK KSKYPFPKPH AEIPIILGEW WKEDIGKLYT 420 RTIQTGGDPN ISDAYLINGQ PGDLYPCSKS DTFKVTVDYG KTYLLRLINS AVQEILFFAI 480 ANHKVTVVGT DASYTKPFTT DYVTISPGQT MDLLLHANQS PNHYYMAATA YVGGAVPYDN 540 TTTRALLQYT NRGTKGNYTP SSIPLLPNLP AHNDTNASVH FSGSLRSLAD KNHPIDVPLK 600 ITNHLFFTVS VNTFACPNNS CAGPNGTRLA ASVNNISFVN PSIDILQAYY YHVNGAFGTR 660 FPKTPPLLFN FTAQDLPLYL QTPKRGTEVK VLEYDATVEL VFQGTNLVAG DDHPMHLHGF 720 SFYVVGMGLG NFDKDKDPLT YNLVDPPLRN TIAVPVNGWT TIRFKADNPG VWFMHCHLDR 780 HMSWGMDMTF IVKNGKDPKA HILPPPPDMP PC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02835 | PLN02835 | 1.0e-47 | 248 | 774 | 534 | + oxidoreductase | ||
| PLN02604 | PLN02604 | 3.0e-73 | 268 | 798 | 563 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 2.0e-73 | 272 | 791 | 550 | + L-ascorbate oxidase | ||
| TIGR03388 | ascorbase | 2.0e-86 | 268 | 800 | 563 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| TIGR03389 | laccase | 0 | 271 | 812 | 542 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 271 | 798 | 5 | 532 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asq_A | 0 | 271 | 798 | 5 | 532 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asp_B | 0 | 271 | 798 | 5 | 532 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1asp_A | 0 | 271 | 798 | 5 | 532 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 1aso_B | 0 | 271 | 798 | 5 | 532 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| Hydropathy |
|---|
 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
