| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna16334.1-v1.0-hybrid |
| Family | CBM57 |
| Protein Properties | Length: 1188 Molecular Weight: 128932 Isoelectric Point: 7.7478 |
| Chromosome | Chromosome/Scaffold: 1 Start: 18725345 End: 18737577 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM57 | 372 | 542 | 2.1e-28 |
| INCGGPEIKSSSDGIVYEKENEFLGPASYFVTGTSRWGVSNVGYFTGSTNPQYTSFSSSQFTNTFDSVLFQTARLSASSIRYFGLGLENGNYTVNLKFAE HVILASATGEFLGRRLFDIYIQGLLVSKDFDILKEAGMSSFKAVQKTYTAHVSENHLEIHLFWAGKGTCCV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1188 Download |
| MSGSASPSVL VLFLCLSSIA QAQVSAPAPQ PQATNATTDP SQARALNSVF EKWKILADPK 60 QWNTTGDPCT GAAIDSTKFD DTDYNPFIIC DCSYQSGTIC HITQLKVYDR EVVGVIPDEL 120 WSLTSLTNLN LALNYLTGPL SAAIANLTGL QYFTVGINNL SGKLPKELGQ LTELKSLAFG 180 GNNFSGSLPS ELGNLSKLQQ LYIDSSGVSG EIPPTFANLQ NLEFFWARNV ELSGRIPDFI 240 GNWSKLSSLR FQGNSFEGPI PFAFSNLTSM KELRISDLSN ASGSSSLSFI ENMKSLNVLE 300 LRNNNISDSF PSNFGVYQTL SQLFLGNNKL NGTLPDYKTA SLLNIGLPSG LACLQRNFPC 360 SRGPGIYYNF GINCGGPEIK SSSDGIVYEK ENEFLGPASY FVTGTSRWGV SNVGYFTGST 420 NPQYTSFSSS QFTNTFDSVL FQTARLSASS IRYFGLGLEN GNYTVNLKFA EHVILASATG 480 EFLGRRLFDI YIQGLLVSKD FDILKEAGMS SFKAVQKTYT AHVSENHLEI HLFWAGKGTC 540 CVPARGTYGP AIAAISATPD FIPTVSNNLP TSKKNRTGLI VGIVVGGGVL LVLLFVVFYL 600 VQRRKRSNPD DDEELYGIDV GPLTFSYTEL KTATNDFDGP NKLGEGGFGP VYRVVNCYMP 660 EGRPPDVCIA LKVRTSLRLP PYDFDDGAPP PQRPPAASPV TFSSRRVHSF PVFRRDHPKL 720 QIKSISLENW NSAESPGMKS GWGSCWSPLG WRGGKVIGDA AGGRWGGGAP SSEPYGGKQR 780 GVRTLRACGR PPLIRTVYIY IHDRYQVRTS ARLLKCGPPS FRHHMAPARA HLIPEGSSSF 840 LDHFPSPASP PNSSFSARLT LFEVLGDMAG KLEFSGLAGE GKWSGKLLES IGVEARPRRL 900 CMVANKETDS QVRTSAPLYG VDFRLYGAAL GRASTPAVPR PLSIPGESAE FQFSGQIAQN 960 FKQSQSGRKT RIRWTHRGWK VVGEAAGVGW GGGAPSSAPG YLAPEYAMRG HLTEKTDVFA 1020 FGVVALEIVS GRPNSDTSLG EEMTYLLEWA WQLHENRREV ELVDSRLSEF NEEEAQRIIK 1080 IGLLCTQASP LLRPSMSRVV GMLSGDMEVT TVTSKPGYLT DWKFDDLTTV TSLTKLDDVS 1140 TVTNLTPDMT TRGTDFSFNN SSASTSIMGQ SPPIAIHSMS QNNVDGG* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 4.0e-15 | 138 | 336 | 202 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-16 | 101 | 345 | 245 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 6.0e-21 | 138 | 335 | 200 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-30 | 93 | 336 | 244 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 6.0e-53 | 368 | 555 | 189 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004672 | protein kinase activity |
| GO:0005515 | protein binding |
| GO:0006468 | protein phosphorylation |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3ulz_A | 8e-19 | 1000 | 1106 | 200 | 309 | A Chain A, Crystal Structure Of A Class V Chitinase From Arabidopsis Thaliana |
| PDB | 3uim_A | 8e-19 | 1000 | 1106 | 200 | 309 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
| PDB | 3tl8_H | 1e-18 | 1000 | 1106 | 208 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
