Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna16720.1-v1.0-hybrid |
Family | GT41 |
Protein Properties | Length: 972 Molecular Weight: 109588 Isoelectric Point: 6.7807 |
Chromosome | Chromosome/Scaffold: 6 Start: 1052568 End: 1060675 |
Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT41 | 551 | 739 | 0 |
RKYAAQCSIIASRFGLPAFNHPAPIPIKRNGGFERLRVGYVSSDFGNHPLSHLMGSVFGMHNKENVEVFCYALSPNDGTEWRQRTQSEAEHFVDVSAMTS DVIAKMINEDNIQILINLNGYTKGARNEIFAMQPAPIQVSYMGFPGTTGANYIDYLVTDEFVSPLRYSHIYSEKLVHLPHCYFVNDYKQ | |||
GT41 | 753 | 952 | 0 |
RLDYGLPEDKFIFATFNQLYKMDPEIFNTWCNILKRVPNSALWLLRFPAAGEMRLRAYAAAQGVQADQIIFTDVAMKGEHIRRSALADLFLDTPLCNAHT TGTDVLWAGLPMVTLPLEKMATRVAGSLCLATGLGDEMIVNSMKEYEEKAVSLALNPPKLQALTNKLKAVRMTCPLFDTARWVRNLERSYFKMWNLHCSG |
Full Sequence |
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Protein Sequence Length: 972 Download |
MMTVHGEARP ARAQFGVESF KPEPSSLSLV SFKPPENHEV DEDAHLALAH QMYKAGNYKE 60 ALEHSSIVYE RNPIRTDNLL LLGAIYYQLH EFDMCIAKNE EALRIEPHFA ECYGNMANAW 120 KEKGNSDLAI RYYLIAIELR PNFCDAWSNL ASAYMRKGRL EEAAQCCRQA LQLNPHLVDA 180 HSNLGNLMKA RGLVQEAYSC YLEALRIQPN FAIAWSNLAG LFMESGDLNR ALQYYKEAVK 240 LKPAFPDAYL NLGNVYKALG LPQEAIVCYQ RALQTRPNYA MAYGNLASTY YEQGQLELAV 300 LHYKQAIVCD PRFLEAYNNL GNALKDVGRV DEAIQCYNQC LTLQPNHPQA LTNLGNIYME 360 WCVILKNMVP AAASYYKATL TVTTGLSAPF NNLAIIYKQQ GNYADAISCY NEVLRIDPLA 420 ADGLVNRGNT YKEIGRVSEA IQDYIHAISV RPTMAEAHAN LASAYKDSGH VEAAIKSYKQ 480 ALHLRPDFPE ATCNLLHTLQ CVCSWEDRDK MFAEVEGIIR RQINMSLLPS VQPFHAIAYP 540 IDSLLALDIS RKYAAQCSII ASRFGLPAFN HPAPIPIKRN GGFERLRVGY VSSDFGNHPL 600 SHLMGSVFGM HNKENVEVFC YALSPNDGTE WRQRTQSEAE HFVDVSAMTS DVIAKMINED 660 NIQILINLNG YTKGARNEIF AMQPAPIQVS YMGFPGTTGA NYIDYLVTDE FVSPLRYSHI 720 YSEKLVHLPH CYFVNDYKQK NQDVLDPNCR HRRLDYGLPE DKFIFATFNQ LYKMDPEIFN 780 TWCNILKRVP NSALWLLRFP AAGEMRLRAY AAAQGVQADQ IIFTDVAMKG EHIRRSALAD 840 LFLDTPLCNA HTTGTDVLWA GLPMVTLPLE KMATRVAGSL CLATGLGDEM IVNSMKEYEE 900 KAVSLALNPP KLQALTNKLK AVRMTCPLFD TARWVRNLER SYFKMWNLHC SGQRPQHFKV 960 AENDSDFPYD R* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3914 | Spy | 0.008 | 124 | 229 | 113 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | ||
COG3914 | Spy | 6.0e-99 | 391 | 947 | 569 | + Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4gz6_D | 0 | 345 | 737 | 6 | 390 | A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase In Complex With Strictosidine |
PDB | 4gz6_D | 0 | 753 | 958 | 514 | 718 | A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase In Complex With Strictosidine |
PDB | 4gz6_D | 2e-29 | 107 | 254 | 6 | 153 | A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase In Complex With Strictosidine |
PDB | 4gz6_D | 1e-27 | 175 | 327 | 6 | 158 | A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase In Complex With Strictosidine |
PDB | 4gz6_D | 2e-26 | 141 | 287 | 6 | 152 | A Chain A, Structure Of Inactive Mutant Of Strictosidine Glucosidase In Complex With Strictosidine |
Sequence Alignments (This image is cropped. Click for full image.) |
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