| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna16762.1-v1.0-hybrid |
| Family | GT1 |
| Protein Properties | Length: 602 Molecular Weight: 65957.1 Isoelectric Point: 7.3306 |
| Chromosome | Chromosome/Scaffold: 6 Start: 1233624 End: 1239873 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 166 | 572 | 0 |
| GTRGDVQPFVAIGKKLQEYGHRVRLATHANFKDFVLTAGLEFFPLGGDPKVLAEYMVKNKGFLPSGPSEVSIQRQQIKEIIFSLLPACKEPDPDSKVPFK AEAIIANPPAYGHSHVAEALRIPLHIFFTMPWTPTSEFPHPLSRVKQPIGYRLSYQIVDALIWLGIRDMINEFRKKMLKLRRTTYLSGYYSTPPDVPYGY IWSPHLVPKPKDWGPKIDVVGFCFLDLASNYEPPDSLVKWLGAGEQPVYVGFGSLPLQEPEKMTNIIIEALKITGQRGIINKGWGGLAVETTDSVYLVDN CPHDWLFLRCSAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPAPIPVDEFTLEKLVDAIRFMLDRKVKERAVEIAKAMENEDGVAGA VKAFHKH | |||
| Full Sequence |
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| Protein Sequence Length: 602 Download |
| MATAPPADHR RADSDSSSDT SVYHDAHLDG NANGSSSSSS GFTERRVSIE ASGGESWNAG 60 TGNGNGTSSG SSSGPTSPKL SQSQSLALYL TRFFDEKIPF RKKLKHIDRV ATVADNGTVH 120 FDVPGDVKPQ LLDFGTGVVY DEESSSATGD EVPDVPPLQI VMLIVGTRGD VQPFVAIGKK 180 LQEYGHRVRL ATHANFKDFV LTAGLEFFPL GGDPKVLAEY MVKNKGFLPS GPSEVSIQRQ 240 QIKEIIFSLL PACKEPDPDS KVPFKAEAII ANPPAYGHSH VAEALRIPLH IFFTMPWTPT 300 SEFPHPLSRV KQPIGYRLSY QIVDALIWLG IRDMINEFRK KMLKLRRTTY LSGYYSTPPD 360 VPYGYIWSPH LVPKPKDWGP KIDVVGFCFL DLASNYEPPD SLVKWLGAGE QPVYVGFGSL 420 PLQEPEKMTN IIIEALKITG QRGIINKGWG GLAVETTDSV YLVDNCPHDW LFLRCSAVVH 480 HGGAGTTAAG LKAACPTTIV PFFGDQPFWG ERVHARGVGP APIPVDEFTL EKLVDAIRFM 540 LDRKVKERAV EIAKAMENED GVAGAVKAFH KHFPSNKSQY ELMPARKGHF SIRRCFGYSY 600 S* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03033 | Glyco_transf_28 | 1.0e-31 | 160 | 304 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| COG1819 | COG1819 | 2.0e-35 | 160 | 571 | 422 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| cd03784 | GT1_Gtf_like | 5.0e-121 | 160 | 572 | 418 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 2e-31 | 158 | 587 | 1 | 392 | A Chain A, Crystal Structure At 1.5a Resolution Of The Barley Alpha- Amylase Isozyme 1 |
| PDB | 3h4i_A | 2e-31 | 158 | 587 | 1 | 392 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 5e-25 | 158 | 553 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 5e-25 | 158 | 553 | 1 | 380 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 2e-20 | 402 | 567 | 230 | 392 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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