Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna16853.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 202 Molecular Weight: 21005 Isoelectric Point: 10.1132 |
Chromosome | Chromosome/Scaffold: 4 Start: 4130555 End: 4139075 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 56 | 130 | 1.4e-28 |
CVAKPGASPKALQANIDYVCGKGVDCKPIQAGGVCSSNDLASKASYVMNAYYQANGRDTFNCDFSGSGQLTTITN |
Full Sequence |
---|
Protein Sequence Length: 202 Download |
MATTTKLVLA LLLLQLATTA YSKGKGAKPG NQPKPGQPGK PAKPNLTPTL GGKKYCVAKP 60 GASPKALQAN IDYVCGKGVD CKPIQAGGVC SSNDLASKAS YVMNAYYQAN GRDTFNCDFS 120 GSGQLTTITN LDESYKMSQE SLAMVAGGAS SGDRTLTAQS ASERLFSLTA ALGRLPPVQE 180 ESWVNGRPIG PMRRSMVAGR R* |
Functional Domains Download unfiltered results here | ||||||
---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam07983 | X8 | 1.0e-24 | 54 | 123 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. |
smart00768 | X8 | 1.0e-32 | 54 | 135 | 83 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 2e-22 | 42 | 135 | 1 | 91 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |