| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna17551.1-v1.0-hybrid |
| Family | GT1 |
| Protein Properties | Length: 761 Molecular Weight: 82576.3 Isoelectric Point: 7.3236 |
| Chromosome | Chromosome/Scaffold: 2 Start: 12003929 End: 12018194 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT1 | 288 | 689 | 0 |
| TRGDVQPFIAIGKRLQDYGHRVRLATHSNFKEFVLTAGLEFYPLGGDPKILAGYMVKNKGFLPSGPSEIPIQRNQIKEIIYSLLPACKDPDLDSGILFKA DAIIANPPAYGHTHVAEALKIPLHIFFTMPWTPTSEFPHPLSRVKQQTGYRLSYQIVDSLIWLGIRDMINDVRKKRLNLRPVTYLSGSQGSESDVPHGYI WSPHLVPKPKDWGPKVDVVGFCFLDLASNYQPPEPLVKWLEAGDKPIYIGFGSLPVQEPQKMTQIIVEALEQTGQRGIINKGWGGLGDLAEPKDSIYLLD NCPHDWLFLHCKAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERVHARGVGPAPIAVDEFSLPKLVAAINYMLDPKVKERAIELAKDMENEDGVTG AV | |||
| Full Sequence |
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| Protein Sequence Length: 761 Download |
| MLVPLDVGLV KALRCAQQLG LRPSATTKGV PLRGSGVSPP YLARGLGHPW SGDRFLISGV 60 RRMRTLGPTF SLWGEINPKP LSSSRFASDL DQDRPRGPEQ AAVMAENRRS SSESSVEVSL 120 AIEREIDGGS GRISVELENG QASGGGGGVS APVTNGSSAG HSGSSDFSFS KANPAEISPT 180 NEKPVQHSVP VKLERSKTES TRPSVLSKEA AKIFDNKIPV QQKLKLLNRI ATVKDDGTVE 240 FDVPGDIEAQ SFGVGTISGS TDVADETLDA TDLQCIPPMQ IVMLIVGTRG DVQPFIAIGK 300 RLQDYGHRVR LATHSNFKEF VLTAGLEFYP LGGDPKILAG YMVKNKGFLP SGPSEIPIQR 360 NQIKEIIYSL LPACKDPDLD SGILFKADAI IANPPAYGHT HVAEALKIPL HIFFTMPWTP 420 TSEFPHPLSR VKQQTGYRLS YQIVDSLIWL GIRDMINDVR KKRLNLRPVT YLSGSQGSES 480 DVPHGYIWSP HLVPKPKDWG PKVDVVGFCF LDLASNYQPP EPLVKWLEAG DKPIYIGFGS 540 LPVQEPQKMT QIIVEALEQT GQRGIINKGW GGLGDLAEPK DSIYLLDNCP HDWLFLHCKA 600 VVHHGGAGTT AAGLKAACPT TIVPFFGDQP FWGERVHARG VGPAPIAVDE FSLPKLVAAI 660 NYMLDPKVKE RAIELAKDME NEDGVTGAVM AFFKHLPPKK PESEPETTSS GLFSINSKLC 720 SSTASGFDHH KQMSTERMAW RDIGHCQQRF PAAERAPPVN * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 1.0e-32 | 278 | 686 | 420 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 4.0e-36 | 281 | 425 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 2.0e-117 | 279 | 689 | 411 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 1e-30 | 279 | 696 | 1 | 381 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
| PDB | 3h4i_A | 1e-30 | 279 | 696 | 1 | 381 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 2e-23 | 279 | 684 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 2e-23 | 279 | 684 | 1 | 387 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1pnv_B | 4e-21 | 279 | 701 | 1 | 392 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| Hydropathy |
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| Sequence Alignments (This image is cropped. Click for full image.) |
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