Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna17714.1-v1.0-hybrid |
Family | GH5 |
Protein Properties | Length: 473 Molecular Weight: 54171.9 Isoelectric Point: 7.9374 |
Chromosome | Chromosome/Scaffold: 6 Start: 20478924 End: 20484799 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH5 | 52 | 418 | 7.3e-31 |
SDGKPFYINGWNSYWLMYHGVDEYTRPRVREILQAGAKMGLTLCRTWAFNDGDYNALQVSPGQFDERVFKALDHVIVEARQQGIRLLLCLVNNLENYGGK SQYVRWAWQEGVGLSASNDSFFFDPSIRNYFKSYIKSYMFHCSRLEGCSGSRSLHKGIKGCNLSCSIRVERTNLGGRKKGIVLTILTRKNTLNGIEYRDD PTIFGWELINEPRCSTDASGDTLQDWIEEMSAFVKLIDKKHLLTVGLEGFYGPKDPKALTVNPERWASRLGSDFIRNSKIPSIDFASVHIYPDHWFHDLE VEDHLKFVTKWMLSHIEDGEKELNKPVMFTEFGLADQLDRFYKTIYDIIYKSAKKHQAGAGALAWQF |
Full Sequence |
---|
Protein Sequence Length: 473 Download |
MVAAGNGLFY PIVGFASCLA LIYLSFGDLR SNFREEDHQL AFVKRNGTQF TSDGKPFYIN 60 GWNSYWLMYH GVDEYTRPRV REILQAGAKM GLTLCRTWAF NDGDYNALQV SPGQFDERVF 120 KALDHVIVEA RQQGIRLLLC LVNNLENYGG KSQYVRWAWQ EGVGLSASND SFFFDPSIRN 180 YFKSYIKSYM FHCSRLEGCS GSRSLHKGIK GCNLSCSIRV ERTNLGGRKK GIVLTILTRK 240 NTLNGIEYRD DPTIFGWELI NEPRCSTDAS GDTLQDWIEE MSAFVKLIDK KHLLTVGLEG 300 FYGPKDPKAL TVNPERWASR LGSDFIRNSK IPSIDFASVH IYPDHWFHDL EVEDHLKFVT 360 KWMLSHIEDG EKELNKPVMF TEFGLADQLD RFYKTIYDII YKSAKKHQAG AGALAWQFIV 420 GGMEKFNDEF GIIPWERPAT YKLIIEHTCR LARIQGPVLE QRNLKELCLQ KH* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam12876 | Cellulase-like | 0.003 | 247 | 342 | 105 | + Sugar-binding cellulase-like. This is a putative cellulase family. | ||
pfam00150 | Cellulase | 0.0005 | 250 | 387 | 139 | + Cellulase (glycosyl hydrolase family 5). | ||
COG3934 | COG3934 | 4.0e-17 | 247 | 433 | 198 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 42 | 454 | 6 | 372 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 5.60519e-45 | 53 | 434 | 23 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 5.60519e-45 | 53 | 434 | 23 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 5.60519e-45 | 53 | 434 | 23 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 5.60519e-45 | 53 | 434 | 23 | 358 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |