| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna17879.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 544 Molecular Weight: 59140.6 Isoelectric Point: 7.4095 |
| Chromosome | Chromosome/Scaffold: 1 Start: 12931582 End: 12934028 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CE8 | 232 | 536 | 0 |
| DVTVCKEEGCECRTVQEAVDKVPENLGAGKRFVIQIKTGVYEETVRVGLAKRNLVFLGDGMGKTVITGSLNVGQPGVTTYNSATVGVLGDGFMASGLTIS NTAGPDAHQAVAFRSDSDLSVIENCEFLGNQDTLYAHGNRQLYKSCKIQGNVDFIFGNSAAIFQDCNILVAPRQLKPEKGENNAVTAHGRTDPAQSTGFV FQNCLINGTEEYMKLYYSKPQVHKNYLGRPWKEYSRTVFLNCSMEALITRQGWMPWSGDFALKTLFYGEYGNTGTGSDLTQRVTWSSKIPTEHVNTYSVQ NFIQG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 544 Download |
| MASLGFVSLL TLTLFLSLSS AARHHHPKPS ATKSAATQIQ LACKATRFPD TCQSSLSQLP 60 DLPPNPTPVE TIALAVRVSS DGLHTAQKMV TDILGASKGN QNRTTAANNC LDVLKNSEYR 120 VSRATEEMSR ARIKSARAAF SAALLYQYDC WSALKYANDT QMVNQTMSFL DGLIGRSSNA 180 LSMMFSYDNF GNDTSLWAPP RTERDGFWER TGGSGDFSGG GGGGVPKGLK ADVTVCKEEG 240 CECRTVQEAV DKVPENLGAG KRFVIQIKTG VYEETVRVGL AKRNLVFLGD GMGKTVITGS 300 LNVGQPGVTT YNSATVGVLG DGFMASGLTI SNTAGPDAHQ AVAFRSDSDL SVIENCEFLG 360 NQDTLYAHGN RQLYKSCKIQ GNVDFIFGNS AAIFQDCNIL VAPRQLKPEK GENNAVTAHG 420 RTDPAQSTGF VFQNCLINGT EEYMKLYYSK PQVHKNYLGR PWKEYSRTVF LNCSMEALIT 480 RQGWMPWSGD FALKTLFYGE YGNTGTGSDL TQRVTWSSKI PTEHVNTYSV QNFIQGDEWM 540 ETI* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 4.0e-106 | 27 | 540 | 524 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02713 | PLN02713 | 2.0e-108 | 27 | 540 | 567 | + Probable pectinesterase/pectinesterase inhibitor | ||
| PLN02301 | PLN02301 | 2.0e-110 | 39 | 542 | 513 | + pectinesterase/pectinesterase inhibitor | ||
| pfam01095 | Pectinesterase | 1.0e-156 | 232 | 537 | 309 | + Pectinesterase. | ||
| PLN02708 | PLN02708 | 0 | 21 | 543 | 532 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 232 | 541 | 8 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 229 | 542 | 1 | 306 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 6e-19 | 231 | 489 | 6 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 6e-19 | 231 | 489 | 6 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 6e-19 | 231 | 489 | 6 | 284 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
