CAZyme Information

Basic Information
SpeciesFragaria vesca
Cazyme IDmrna17899.1-v1.0-hybrid
FamilyGH18
Protein PropertiesLength: 890 Molecular Weight: 99699.6 Isoelectric Point: 8.5067
ChromosomeChromosome/Scaffold: 1 Start: 13065867 End: 13077226
DescriptionO-fucosyltransferase family protein
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH186458392.1e-21
  LGFAIDADESGNFQNGKFSPYWIPELTPNSVADIKASHPNVKVMVSLSGWSIGEKTLHWYIPENSEKWISNAVSSLTSIITTYHLDGIDVDYEKFRNTSA
  TNANFAYCIGELITRLKDQGVISVASIAPFYSTVAPYIALFKDYGHAIDYVNYQFYTDKVRTPKGYLKAFENRANQFDKAKLLPAYEVNGRGIQG
Full Sequence
Protein Sequence     Length: 890     Download
MSDSDLSLLP GDEGGGFVKA LESYPVHWIP FLVWVRSVAR GFEDVVRVLV RLWRGGSLQL    60
GGGKWSFAAT VRLTNTGMNL DPDAAGPCIA GGRVLKARLY RVDDYGGSTA AQRRRDGGGG    120
LNGLRAGVGT QQAMSTLGRQ QVLCFVKWTL SSNGRMADAD LWDAPHSYGL RPCVKPTSRY    180
KAATGWDHYM TVRSNGGLNQ MRTGIADVVA VARIMNATLV IPQLDKRSFW HDSSTFSDIF    240
DEIHFIETLR EDVKIVKELP LELANVPRAR KHFTSWASTS YYEDMTQLWK EYQVIHVAKS    300
DSRLANNDLP LDIQRLRCRA LYHALRFSPP IESFGKVFLI EVYCLEANEA APCMTLTPQK    360
LVERLRARGG KYIALHLRYE KDMLSFTGCS YGLTEEESEE LRIMRENTNH WKVKTINSTE    420
QRLGGFCPLT PKEIGIFLRA LGYPPSSLIY IAAGEIYGGN TRLLELTSRF PNIVFKETLA    480
SQEELKAFTN HASQTAALDY VISVKSDVFV PSYSGNMARA VEGQRRFLGH RKTITPDRKG    540
LVEVFDMLEN GQQTEGSSLS HIIKTMHKNR KGAPRRRRGP LPEMKGRARL RTEESFYENP    600
YPECICAPKK HLGGKVMMEY IGATGVSVSF DDVPINDEID FNFILGFAID ADESGNFQNG    660
KFSPYWIPEL TPNSVADIKA SHPNVKVMVS LSGWSIGEKT LHWYIPENSE KWISNAVSSL    720
TSIITTYHLD GIDVDYEKFR NTSATNANFA YCIGELITRL KDQGVISVAS IAPFYSTVAP    780
YIALFKDYGH AIDYVNYQFY TDKVRTPKGY LKAFENRANQ FDKAKLLPAY EVNGRGIQGD    840
IFFDALDLLE KNGFLVNGVM IFSADASSEN KYYYEKKSQA FLLLNSKSV* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00598GH18_chitinase-like2.0e-13643800164+
pfam00704Glyco_hydro_184.0e-16643800164+
cd06544GH18_narbonin7.0e-100616867258+
pfam10250O-FucT5.0e-107195532348+
cd11299O-FucT_plant3.0e-146189533348+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3sim_B06168832274A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB3sim_A06168832274A Chain A, Crystallographic Structure Analysis Of Family 18 Chitinase From Crocus Vernus
PDB1nar_A4e-246168674266A Chain A, Crystal Structure Of Narbonin Refined At 1.8 Angstroms Resolution
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_046_00008.1Aquca_014_00353.1Aquca_010_00636.1Aquca_027_00184.1
Brachypodium distachyonBradi3g26850.1Bradi3g26810.1Bradi3g26840.1
Carica papayaevm.model.supercontig_139.6
Citrus clementinaCiclev10028881mCiclev10003729m
Citrus sinensisorange1.1g021511morange1.1g046094m
Eucalyptus grandisEucgr.B02439.1Eucgr.J02106.1
Fragaria vescamrna14033.1-v1.0-hybrid.59.211mrna14019.1-v1.0-hybridmrna15882.1-v1.0-hybridmrna14034.1-v1.0-hybridmrna22564.1-v1.0-hybrid
Glycine maxGlyma11g15512.1Glyma09g21615.1Glyma13g40590.1
Gossypium raimondiiGorai.003G135700.1Gorai.003G135800.1Gorai.003G134100.1Gorai.003G129600.1Gorai.011G120000.1
Gorai.003G138400.1
Linum usitatissimumLus10005172
Malus domesticaMDP0000904158MDP0000885802MDP0000644797MDP0000312089
Manihot esculentacassava4.1_024209mcassava4.1_027074m
Medicago truncatulaMedtr6g079630.1Medtr2g096030.1
Mimulus guttatusmgv1a019267mmgv1a024804m
Oryza sativaLOC_Os10g28050.1LOC_Os10g28080.1
Panicum virgatumPavirv00061810mPavirv00014582mPavirv00031712m
Phaseolus vulgarisPhvul.011G069900.1
Picea abiesMA_38396g0010MA_10427109g0010
Populus trichocarpaPotri.012G102400.1Potri.015G100500.1Potri.015G100600.1Potri.001G341700.1
Prunus persicappa023801mppa009038mppa009096m
Ricinus communis30039.m00023530039.m000234
Setaria italicaSi022612mSi026720mSi028172mSi036765mSi036774m
Selaginella moellendorffii41118115493
Sorghum bicolorSb01g021920.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny