Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna18171.1-v1.0-hybrid |
Family | GT14 |
Protein Properties | Length: 359 Molecular Weight: 41338.5 Isoelectric Point: 10.0411 |
Chromosome | Chromosome/Scaffold: 6 Start: 4571686 End: 4572762 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 11 | 266 | 0 |
FSYLISASKGDSVKLKRMLYALYHPGNYYLIHMDYEATEAEHRDIAEFVGGNPVFGQVGNVWIVGKPNLVTYRGPTMLATTIHALALLLRTCSRWDWFIN LSASDYPLITQDDLIHAFSDLPRDLNFIQHTSHLGWKLNKRGKPITIDPALYSLNKSELWWVIKQRTLPTAFKLYTGSAWTMLSRSFAEYCVVGWDNLPR TLLLYYTNFVSSPEGYFQTLICNSEDYKNTTINHDLHYISWDTPPKQHPRSLGLRD |
Full Sequence |
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Protein Sequence Length: 359 Download |
MSITNPYPVT FSYLISASKG DSVKLKRMLY ALYHPGNYYL IHMDYEATEA EHRDIAEFVG 60 GNPVFGQVGN VWIVGKPNLV TYRGPTMLAT TIHALALLLR TCSRWDWFIN LSASDYPLIT 120 QDDLIHAFSD LPRDLNFIQH TSHLGWKLNK RGKPITIDPA LYSLNKSELW WVIKQRTLPT 180 AFKLYTGSAW TMLSRSFAEY CVVGWDNLPR TLLLYYTNFV SSPEGYFQTL ICNSEDYKNT 240 TINHDLHYIS WDTPPKQHPR SLGLRDFRRM VQSNRPFARK FKENTPVLKK IDQQLLKRRR 300 GQFAYGGWCS GKEKTQSLCS GLQSENYGVL RPGPGSRRLK SLLTKLISTR NHQKQQCR* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 4.0e-69 | 11 | 271 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 2.0e-165 | 11 | 358 | 348 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000007 | 7 | 298 | 84 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000007 | 7 | 298 | 84 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000007 | 7 | 298 | 84 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000007 | 7 | 298 | 84 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0000002 | 7 | 298 | 84 | 384 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
Sequence Alignments (This image is cropped. Click for full image.) |
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