Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna18442.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 586 Molecular Weight: 64610.2 Isoelectric Point: 9.5983 |
Chromosome | Chromosome/Scaffold: 6 Start: 5484771 End: 5487256 |
Description | laccase 17 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 30 | 577 | 0 |
KTRHYTFNIQYHNVTRLCSTRKIVTVNGKFPGPRLVAREGDRVLVKVVNHIKENVTIHWHGIRQLRSGWADGPAYITQCPIQTGQSYTYNFTIIGQRGTL WYHAHISWLRSTLYGPIILLPRRNESYPFVKPYKEIPIILGEWFKTDPEAVINQALQTGGGPNVSDAYTLNGLPGPMYNCSSNDVFKLKVKPGKTYHLRL INAALNDELFFSVANHSLTVVCADATYVKPFTTDILLITPGQTTGVLLKTKPNFPNATFLILTRPYFTGAGTLDNTTAAGILKYEHPLSSSGTPSSIKTL PLLKPSLPPINGTKFVNVTQFVQNLASKYRSLDSAKYPAKVPQTVDRKFFFTVGLGTSPCPKNTTCQGPNGQKFAAAINNVSFAMPSVAMLQTHFFAQSN VTYRTDFPSNPIVQFNYTGTPPNNTNVINSTRAVVIPFNTTVELVLQDTSILGAESHPLHLHGFNFYIVGQGFGNFDQNKDPAKFNLVDPVERNTVGVPA GGWAAIRFLADNPGVWFMHCHLEIHTSWGLKMAWIVQDGPQPNQKLPP |
Full Sequence |
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Protein Sequence Length: 586 Download |
MGYLHVPAMA AWLFGLCVAA ALMPELAEGK TRHYTFNIQY HNVTRLCSTR KIVTVNGKFP 60 GPRLVAREGD RVLVKVVNHI KENVTIHWHG IRQLRSGWAD GPAYITQCPI QTGQSYTYNF 120 TIIGQRGTLW YHAHISWLRS TLYGPIILLP RRNESYPFVK PYKEIPIILG EWFKTDPEAV 180 INQALQTGGG PNVSDAYTLN GLPGPMYNCS SNDVFKLKVK PGKTYHLRLI NAALNDELFF 240 SVANHSLTVV CADATYVKPF TTDILLITPG QTTGVLLKTK PNFPNATFLI LTRPYFTGAG 300 TLDNTTAAGI LKYEHPLSSS GTPSSIKTLP LLKPSLPPIN GTKFVNVTQF VQNLASKYRS 360 LDSAKYPAKV PQTVDRKFFF TVGLGTSPCP KNTTCQGPNG QKFAAAINNV SFAMPSVAML 420 QTHFFAQSNV TYRTDFPSNP IVQFNYTGTP PNNTNVINST RAVVIPFNTT VELVLQDTSI 480 LGAESHPLHL HGFNFYIVGQ GFGNFDQNKD PAKFNLVDPV ERNTVGVPAG GWAAIRFLAD 540 NPGVWFMHCH LEIHTSWGLK MAWIVQDGPQ PNQKLPPPPA DLPQC* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07731 | Cu-oxidase_2 | 3.0e-41 | 435 | 568 | 140 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
pfam07732 | Cu-oxidase_3 | 2.0e-54 | 37 | 151 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02604 | PLN02604 | 1.0e-87 | 9 | 559 | 585 | + oxidoreductase | ||
TIGR03388 | ascorbase | 7.0e-91 | 31 | 559 | 559 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 29 | 568 | 541 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 30 | 576 | 2 | 532 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asq_A | 0 | 30 | 576 | 2 | 532 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_B | 0 | 30 | 576 | 2 | 532 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_A | 0 | 30 | 576 | 2 | 532 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1aso_B | 0 | 30 | 576 | 2 | 532 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |