Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna18444.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 594 Molecular Weight: 65505.7 Isoelectric Point: 10.2826 |
Chromosome | Chromosome/Scaffold: 6 Start: 5497293 End: 5499653 |
Description | laccase 17 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 39 | 581 | 0 |
TRHYKFNIMSQSVTRLCKTKSIITVNGQFPGPRIVAREGDRLVIKFSPPMLSIGLHFDDRHGIRQLRSGWADGPSYITQCPIQTGQSYVYNFTITGQRGT LWWHAHISWLRATLYGPIVILPKKHVPYPFPQPFKEVPIIFGEWWKADTETVINQAIQTGSGPNVSDAYTINGLPGPLYNCSAKDTYKLKVKPGKTYLLR LINAALNNELFFSIANHTFTVVEADAVYVKPFSTKVVLITPGQTTNVILRTKPKSPNATFVMAARPYVSGPAAFDNTTTSGLLEYETSVSSNHNKNKNKR KKKLLLLTPVLPKLNDTMFSMNYNKKIRSLANPKFPSANVPKTVDKNFFFTVGLGLSPCSKNQNCPGPNNTRVAAAINNVSFVQPSTALLQAHFFNKTKG VYTTDFPANPLVKFNYTGTPPSNIAVSTGTKVVVLPFNTRVELVLQDTSIIGAESHPLHLHGFNFFVVGFGFGNFDPKNDPKKYNLVDPAERNTIGVPSG GWVALRFLADNPGVWFMHCHLEVHTSWGLKMAWVVMDGKGRHQ |
Full Sequence |
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Protein Sequence Length: 594 Download |
MGSSHPASPA LSMATVFFSV CAFFCVLPEL AVGKHAGVTR HYKFNIMSQS VTRLCKTKSI 60 ITVNGQFPGP RIVAREGDRL VIKFSPPMLS IGLHFDDRHG IRQLRSGWAD GPSYITQCPI 120 QTGQSYVYNF TITGQRGTLW WHAHISWLRA TLYGPIVILP KKHVPYPFPQ PFKEVPIIFG 180 EWWKADTETV INQAIQTGSG PNVSDAYTIN GLPGPLYNCS AKDTYKLKVK PGKTYLLRLI 240 NAALNNELFF SIANHTFTVV EADAVYVKPF STKVVLITPG QTTNVILRTK PKSPNATFVM 300 AARPYVSGPA AFDNTTTSGL LEYETSVSSN HNKNKNKRKK KLLLLTPVLP KLNDTMFSMN 360 YNKKIRSLAN PKFPSANVPK TVDKNFFFTV GLGLSPCSKN QNCPGPNNTR VAAAINNVSF 420 VQPSTALLQA HFFNKTKGVY TTDFPANPLV KFNYTGTPPS NIAVSTGTKV VVLPFNTRVE 480 LVLQDTSIIG AESHPLHLHG FNFFVVGFGF GNFDPKNDPK KYNLVDPAER NTIGVPSGGW 540 VALRFLADNP GVWFMHCHLE VHTSWGLKMA WVVMDGKGRH QKLPPPPSDL PKC* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-43 | 51 | 162 | 115 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 5.0e-57 | 55 | 584 | 567 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 4.0e-66 | 12 | 584 | 607 | + oxidoreductase | ||
TIGR03388 | ascorbase | 5.0e-80 | 39 | 585 | 576 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 39 | 593 | 557 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 40 | 584 | 4 | 532 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1asq_A | 0 | 40 | 584 | 4 | 532 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1asp_B | 0 | 40 | 584 | 4 | 532 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1asp_A | 0 | 40 | 584 | 4 | 532 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aso_B | 0 | 40 | 584 | 4 | 532 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |