Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna18474.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 346 Molecular Weight: 36487.5 Isoelectric Point: 4.9244 |
Chromosome | Chromosome/Scaffold: 7 Start: 181587 End: 182754 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 259 | 340 | 4.7e-34 |
WCVAKPSVPDPIIQEAMNYACGSGADCDAIQPNGSCFQPDSLFAHASFAFNSYWQRTKVAGGTCDFGGTAILVTADPSYDGC |
Full Sequence |
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Protein Sequence Length: 346 Download |
MRLLKGLTNP PPTHHKSLFL RTAKKLNLVK RIEYFPFGSS KQQNGEPYGL NSPLSMPPFD 60 SLAPVSLPNP NAPPFCTYPP NTPQTPSTTT PTPTTTSPPS PPSPDSPYLY IPPILPMQSP 120 PPGPIITIPG SPQSISAPNL PPPGTMPGPP ESVPSPTIYF PGPPQSILTP SPPDVVPSPV 180 TYIPGPPQSI STPNPPEIVP SPPDYEPSPP DYSIPSPTSF VPSPPYGFQP SPPVFEPPVV 240 FPPPTTPPSP KKGPIAALWC VAKPSVPDPI IQEAMNYACG SGADCDAIQP NGSCFQPDSL 300 FAHASFAFNS YWQRTKVAGG TCDFGGTAIL VTADPSYDGC RFDYV* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 8.0e-27 | 258 | 329 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-43 | 258 | 342 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 6e-20 | 248 | 342 | 5 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
Sequence Alignments (This image is cropped. Click for full image.) |
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