Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna18694.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 700 Molecular Weight: 77375.1 Isoelectric Point: 6.6478 |
Chromosome | Chromosome/Scaffold: 7 Start: 1418989 End: 1425066 |
Description | laccase 6 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 197 | 695 | 0 |
TRFYDFKVQSTRVAKLCTSKDMVTINGMFPGPVVYAQEDDRVIVKVTNETPYNTTIHWHGVRQKLSCWFDGPSYITQCPIQAGQSFTYEFTMVKQKGTFF WHAHVSWLRATVYGALIVYPKTGVPYPFKVPYEEHIIILGEYWLQDVVQLEHDTAASGGPPTPASAFTINGHPGPNYNCSNNDVYQIDVVSGKTYMLRLV HAGLNVESFFAIANHNLTIVEADAEYTKPFTTDRVMLGPGQTMVVLVTADQPQGKYSMAMGPYMSAKGVKFQNISSVAYFQYLGAVPNSFSLPAKLPSFN DNLAVKTVMDGLRSLTAPVNVPRKIDSELFVTIGLNVQKCHSKTPKKDCQGLNNGVMAASMNNISFVKPKVSVLEAYYKRINGYFTEDFPKVPQKFYDFV NGAPNSIPNNTEAISNGTRTLVLEYGTRVQLILQDTGTVTTENHPIHLHGYSFYVVGYGTGNYSPQNASFNLVDPPYMNTIGVPVGGWAAIRFIADNPG |
Full Sequence |
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Protein Sequence Length: 700 Download |
MENNNCMSVL SCVSTNVASA FFASLERCSC INLSTTDFED DNNFSAADDH GSLLLSSGPT 60 SEPNLNQPAP ASAAAAAAQE VLCGLVSCRH MGKKGTVDIC LHMALPESHI DDELDVILVF 120 LRISITRQRW IIYSFALFPF RTRSLGTAAL RLLREASAEL DEPFPTVESE FRKEQNLLLI 180 LGYNVLVMAQ WPSGGQTRFY DFKVQSTRVA KLCTSKDMVT INGMFPGPVV YAQEDDRVIV 240 KVTNETPYNT TIHWHGVRQK LSCWFDGPSY ITQCPIQAGQ SFTYEFTMVK QKGTFFWHAH 300 VSWLRATVYG ALIVYPKTGV PYPFKVPYEE HIIILGEYWL QDVVQLEHDT AASGGPPTPA 360 SAFTINGHPG PNYNCSNNDV YQIDVVSGKT YMLRLVHAGL NVESFFAIAN HNLTIVEADA 420 EYTKPFTTDR VMLGPGQTMV VLVTADQPQG KYSMAMGPYM SAKGVKFQNI SSVAYFQYLG 480 AVPNSFSLPA KLPSFNDNLA VKTVMDGLRS LTAPVNVPRK IDSELFVTIG LNVQKCHSKT 540 PKKDCQGLNN GVMAASMNNI SFVKPKVSVL EAYYKRINGY FTEDFPKVPQ KFYDFVNGAP 600 NSIPNNTEAI SNGTRTLVLE YGTRVQLILQ DTGTVTTENH PIHLHGYSFY VVGYGTGNYS 660 PQNASFNLVD PPYMNTIGVP VGGWAAIRFI ADNPGKVYVW |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 1.0e-48 | 203 | 319 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-59 | 185 | 700 | 549 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-73 | 195 | 700 | 551 | + oxidoreductase | ||
TIGR03388 | ascorbase | 1.0e-79 | 197 | 700 | 541 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 195 | 700 | 511 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 196 | 700 | 2 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asq_A | 0 | 196 | 700 | 2 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_B | 0 | 196 | 700 | 2 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_A | 0 | 196 | 700 | 2 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1aso_B | 0 | 196 | 700 | 2 | 503 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
Sequence Alignments (This image is cropped. Click for full image.) |
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