Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna18760.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 566 Molecular Weight: 61938.9 Isoelectric Point: 7.263 |
Chromosome | Chromosome/Scaffold: 6 Start: 6117876 End: 6120304 |
Description | laccase 7 |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 22 | 549 | 0 |
AAIVEQSFNVNNLTVTRLCKNQLITAVNGQYPGPTIRATEGDTLVVHVLNQSPYNLTIHWHGIFQLLSAWADGPAYVTQCPILPGKSYTYRFKITGQEGT LWWHAHVSWLRATVYGALIIHPRFPRSYPFPAPFQDVPIMLGEWWNANVVDVENQGLATGGAPNNSNAYTINGLPGDFYNCSQNQIYKLNVVRGKTYMLR IINAALNDQLFFGIAKHNMTVVAVDASYTKPYVTEVVVVAPGQTTDVLITANQPVGSYYMAATPYASATIPFPNTTTRGVLIYIGYLSSRAPLMPALPNP RDTSTAHRFSSNLTGLAGGPHWVSVPLQVDEHMFVTIGVNLDVCAEGVTCQGPLNNRLSASMNNESFQLPTTLSMLEASVYNVSGIYTTDFPDNPPVKFD YTNANISLDLNLIFAPKSTKVKKLKYNSTVEIVLQNTAFLAIENHPIHLHGFNFHVLAQGFGNYDSVNDSKKFNLVDPQLRNTIGVPVGGWAVIRFQANN PGVWMMHCHLDVHLPWGLAMAFEVENGP |
Full Sequence |
---|
Protein Sequence Length: 566 Download |
MARFVFALAC ALALLASSVA SAAIVEQSFN VNNLTVTRLC KNQLITAVNG QYPGPTIRAT 60 EGDTLVVHVL NQSPYNLTIH WHGIFQLLSA WADGPAYVTQ CPILPGKSYT YRFKITGQEG 120 TLWWHAHVSW LRATVYGALI IHPRFPRSYP FPAPFQDVPI MLGEWWNANV VDVENQGLAT 180 GGAPNNSNAY TINGLPGDFY NCSQNQIYKL NVVRGKTYML RIINAALNDQ LFFGIAKHNM 240 TVVAVDASYT KPYVTEVVVV APGQTTDVLI TANQPVGSYY MAATPYASAT IPFPNTTTRG 300 VLIYIGYLSS RAPLMPALPN PRDTSTAHRF SSNLTGLAGG PHWVSVPLQV DEHMFVTIGV 360 NLDVCAEGVT CQGPLNNRLS ASMNNESFQL PTTLSMLEAS VYNVSGIYTT DFPDNPPVKF 420 DYTNANISLD LNLIFAPKST KVKKLKYNST VEIVLQNTAF LAIENHPIHL HGFNFHVLAQ 480 GFGNYDSVND SKKFNLVDPQ LRNTIGVPVG GWAVIRFQAN NPGVWMMHCH LDVHLPWGLA 540 MAFEVENGPT LSSTLPPPPL DLPKC* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-50 | 30 | 144 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 3.0e-65 | 40 | 543 | 539 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 3.0e-86 | 40 | 544 | 529 | + oxidoreductase | ||
TIGR03388 | ascorbase | 2.0e-87 | 40 | 544 | 539 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 29 | 548 | 520 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 40 | 543 | 19 | 521 | A Chain A, Pfsub2 Solution Nmr Structure |
PDB | 1asq_A | 0 | 40 | 543 | 19 | 521 | A Chain A, Pfsub2 Solution Nmr Structure |
PDB | 1asp_B | 0 | 40 | 543 | 19 | 521 | A Chain A, Pfsub2 Solution Nmr Structure |
PDB | 1asp_A | 0 | 40 | 543 | 19 | 521 | A Chain A, Pfsub2 Solution Nmr Structure |
PDB | 1aso_B | 0 | 40 | 543 | 19 | 521 | A Chain A, Pfsub2 Solution Nmr Structure |