Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna18812.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 562 Molecular Weight: 61075.2 Isoelectric Point: 9.6863 |
Chromosome | Chromosome/Scaffold: 6 Start: 6427955 End: 6430540 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 23 | 547 | 0 |
RVRNYKFNVVLRNTTRLCSTKPIVTINGRFPGPTLYAREDDTVLVKVTNHVTYNVSIHWHGIRQIRTGWSDGPAYITQCPIPQGQSFTYNFTITGQRGTL LWHAHILWLRATVHGALVILPKRGVPYPFPTPHKEVPVVLAEWWKSDTEAVINEALKGGLAPNVSDAHTINGHPGLVSPNCTTDGGFKLSVESGKTYLLR IINAALNEELFFKIAGHKLTIVEVDATYVKPFKTDTIVIAPGQTTNALITANQKSGKYLVTASPFLDTPGIAVDNLTSTATVHYSGTLSNSPTTLTSPPP QNATQVANSFTDSLRSLNTMKFPAKVPLKIDHNLLFTIGLGINPCPSCKAGNGSRVVASINNVTFVMPTTALLQAHFFKTKGVFTTDFPANPPNAFNFSG GLPANSSLATTNGTKVYRLAYNSTVQLVLQDTGIIAPENHPVHLHGFNFFAIGRGLGNYNPKTDPKNFNLVDPVERNTIGVPSGGWVAIRFIADNPGVWF MHCHLEVHTSWGLKMAFLVDNGKGP |
Full Sequence |
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Protein Sequence Length: 562 Download |
MASWIRVLLL LLACLLPALV ESRVRNYKFN VVLRNTTRLC STKPIVTING RFPGPTLYAR 60 EDDTVLVKVT NHVTYNVSIH WHGIRQIRTG WSDGPAYITQ CPIPQGQSFT YNFTITGQRG 120 TLLWHAHILW LRATVHGALV ILPKRGVPYP FPTPHKEVPV VLAEWWKSDT EAVINEALKG 180 GLAPNVSDAH TINGHPGLVS PNCTTDGGFK LSVESGKTYL LRIINAALNE ELFFKIAGHK 240 LTIVEVDATY VKPFKTDTIV IAPGQTTNAL ITANQKSGKY LVTASPFLDT PGIAVDNLTS 300 TATVHYSGTL SNSPTTLTSP PPQNATQVAN SFTDSLRSLN TMKFPAKVPL KIDHNLLFTI 360 GLGINPCPSC KAGNGSRVVA SINNVTFVMP TTALLQAHFF KTKGVFTTDF PANPPNAFNF 420 SGGLPANSSL ATTNGTKVYR LAYNSTVQLV LQDTGIIAPE NHPVHLHGFN FFAIGRGLGN 480 YNPKTDPKNF NLVDPVERNT IGVPSGGWVA IRFIADNPGV WFMHCHLEVH TSWGLKMAFL 540 VDNGKGPNQS LLPPPKDLPT C* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 4.0e-48 | 21 | 527 | 510 | + oxidoreductase | ||
pfam07732 | Cu-oxidase_3 | 2.0e-49 | 30 | 146 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
TIGR03388 | ascorbase | 2.0e-92 | 24 | 539 | 546 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 23 | 561 | 542 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 22 | 539 | 1 | 521 | A Chain A, Crystal Structure Of The Catalytic Core Domain Of Jmjd2d |
PDB | 1asq_A | 0 | 22 | 539 | 1 | 521 | A Chain A, Crystal Structure Of The Catalytic Core Domain Of Jmjd2d |
PDB | 1asp_B | 0 | 22 | 539 | 1 | 521 | A Chain A, Crystal Structure Of The Catalytic Core Domain Of Jmjd2d |