CAZyme Information

Basic Information
SpeciesFragaria vesca
Cazyme IDmrna19212.1-v1.0-hybrid
FamilyGH18
Protein PropertiesLength: 424 Molecular Weight: 48156.9 Isoelectric Point: 9.4554
ChromosomeChromosome/Scaffold: 7 Start: 2013772 End: 2017272
DescriptionGlycosyl hydrolase superfamily protein
View CDS
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH18984152.4e-36
  YPVLAYITPWNSKGYDLAKRFNSKFTHISPVWYDLKSQGASLILEGRHNADIGWISDLRRAGDAWVLPRVVLEAFPAELLAKKKQRKKAIDLIVSECKEM
  GYDGIVLESWSRWAVYRVLNDPKMRNLALQFIKDLGDALHAVTSERNNKNRLQLVYVIGPPHSETLQVNDFGPKDLQSLSDAVDGFSLMTYDFSGPHNPG
  PNAPLKWIESILQLLLGTNKNTALANKILLGINFYGNDFILSEGQGGGAITGRDYLSLLEKHKPDFRWEKNSAEHLLLYTDDDHNNHAVFYPSLLSISMR
  LEEARKWGCGISIWEIGQ
Full Sequence
Protein Sequence     Length: 424     Download
MAKKKDRRVV APSSDRRKDR VEPPHQLARS TSFSNRNLAI TFFVVFVVSS AVSVLVYRRL    60
SFAPITDRTE SYVFRRGLVK PDENAHVSEN ATGRHYKYPV LAYITPWNSK GYDLAKRFNS    120
KFTHISPVWY DLKSQGASLI LEGRHNADIG WISDLRRAGD AWVLPRVVLE AFPAELLAKK    180
KQRKKAIDLI VSECKEMGYD GIVLESWSRW AVYRVLNDPK MRNLALQFIK DLGDALHAVT    240
SERNNKNRLQ LVYVIGPPHS ETLQVNDFGP KDLQSLSDAV DGFSLMTYDF SGPHNPGPNA    300
PLKWIESILQ LLLGTNKNTA LANKILLGIN FYGNDFILSE GQGGGAITGR DYLSLLEKHK    360
PDFRWEKNSA EHLLLYTDDD HNNHAVFYPS LLSISMRLEE ARKWGCGISI WEIGQGLDYF    420
YDLL 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam00704Glyco_hydro_189.0e-14174415257+
COG3858COG38585.0e-21176424257+
cd02874GH18_CFLE_spore_hydrolase7.0e-29100424341+
smart00636Glyco_181.0e-32100415354+
cd02876GH18_SI-CLP6.0e-15296424334+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975carbohydrate metabolic process
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB3bxw_A07642448393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3bxw_B07642448393B Chain B, Crystal Structure Of Stabilin-1 Interacting Chitinase-Like Protein, Si-Clp
PDB3cz8_B0.0000221241386308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB3cz8_A0.0000221241386308A Chain A, Crystal Structure Of Putative Sporulation-Specific Glycosylase Ydhd From Bacillus Subtilis
PDB1ll7_B0.0005178343107269A Chain A, Structure Of The E171q Mutant Of C. Immitis Chitinase 1
Transmembrane Domains
StartEnd
3857
Hydropathy
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_013_00129.1
Arabidopsis lyrata352729
Arabidopsis thalianaAT4G01040.1
Brachypodium distachyonBradi2g43770.1
Brassica rapaBra000939
Carica papayaevm.model.supercontig_273.9
Capsella rubellaCarubv10001405m
Chlamydomonas reinhardtiiCre03.g200650.t1.1
Citrus clementinaCiclev10020231m
Citrus sinensisorange1.1g014108morange1.1g014001m
Cucumis sativusCucsa.259130.2Cucsa.259130.1
Eucalyptus grandisEucgr.E00067.1
Glycine maxGlyma03g41760.2Glyma19g44401.1Glyma03g41760.1
Gossypium raimondiiGorai.008G124300.1
Linum usitatissimumLus10005946Lus10029447
Malus domesticaMDP0000223446MDP0000126058
Manihot esculentacassava4.1_001521m
Medicago truncatulaMedtr5g025480.1
Mimulus guttatusmgv1a010899m
Oryza sativaLOC_Os01g43220.1
Panicum virgatumPavirv00054484mPavirv00033212m
Physcomitrella patensPp1s162_65V6.1
Phaseolus vulgarisPhvul.006G111900.1
Picea abiesMA_557825g0010
Populus trichocarpaPotri.014G096700.1Potri.014G096700.2Potri.014G096700.4Potri.014G096700.3
Prunus persicappa006146m
Ricinus communis29742.m001446
Setaria italicaSi002099m
Selaginella moellendorffii249085240
Sorghum bicolorSb03g028160.1
Thellungiella halophilaThhalv10028671m
Vitis viniferaGSVIVT01027076001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny