Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna20428.1-v1.0-hybrid |
Family | AA1 |
Protein Properties | Length: 629 Molecular Weight: 69828.5 Isoelectric Point: 9.4404 |
Chromosome | Chromosome/Scaffold: 5 Start: 3711384 End: 3714995 |
Description | laccase 11 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 28 | 569 | 0 |
AAVKSYQFNIQVKNVSRLCHSKPIVTVNGMFPGPTIYAREGDTLLVNVTNHAQYNMSIHWHGLKQYRNGWADGPAYITQCPIMTGNTYTYNMTITGQRGT LWWHAHIFWLRATVYGAIVILPKQGTGFPFPQPYSETNLILGEWWNNDVEEVVKQGNRLGLPPNMSDAHTINGKPGPLFPCSEKHTYAMEVEQGKTYLLR IINAALNDELFFAIAGHNLTVVEIDAIYTKPFTSQAILIAPGQTTNVLVQANQVPSRYFMAARPFMDAPLSIDNKTATAILQYKGIPNSVLPVLSQLPAL NDTAFALSYNAKLKSLNTAKYPANVPLKVDRQLFYTIGLGINQCSTCLNGTQLTASLNNITFVMPKIGLLQAHYFNTKGVFTTDFPDRPPTPFNYTGAPL TANLGTKLGTRLSKIAFNSTVELVLQDTNLLTVESHPFHLHGYNFFVVGTGVGNFDSKKNPAKFNLVDPPERNTVGVPTGGWVAVRFRADNPGVWFMHCH LELHTGWGLKTAFVVENGKSSDQSVLPPPADLPPYVTRSDRR |
Full Sequence |
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Protein Sequence Length: 629 Download |
MAKTTNLCFC SLLPFLCLVA FFFIPAKAAV KSYQFNIQVK NVSRLCHSKP IVTVNGMFPG 60 PTIYAREGDT LLVNVTNHAQ YNMSIHWHGL KQYRNGWADG PAYITQCPIM TGNTYTYNMT 120 ITGQRGTLWW HAHIFWLRAT VYGAIVILPK QGTGFPFPQP YSETNLILGE WWNNDVEEVV 180 KQGNRLGLPP NMSDAHTING KPGPLFPCSE KHTYAMEVEQ GKTYLLRIIN AALNDELFFA 240 IAGHNLTVVE IDAIYTKPFT SQAILIAPGQ TTNVLVQANQ VPSRYFMAAR PFMDAPLSID 300 NKTATAILQY KGIPNSVLPV LSQLPALNDT AFALSYNAKL KSLNTAKYPA NVPLKVDRQL 360 FYTIGLGINQ CSTCLNGTQL TASLNNITFV MPKIGLLQAH YFNTKGVFTT DFPDRPPTPF 420 NYTGAPLTAN LGTKLGTRLS KIAFNSTVEL VLQDTNLLTV ESHPFHLHGY NFFVVGTGVG 480 NFDSKKNPAK FNLVDPPERN TVGVPTGGWV AVRFRADNPG VWFMHCHLEL HTGWGLKTAF 540 VVENGKSSDQ SVLPPPADLP PYVTRSDRRG KKTRFVLFGG EENALLLDWE KKMLQTGPRQ 600 KSMWASCPLV AVEVFQNEWA RFRLGLSK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
TIGR03390 | ascorbOXfungal | 4.0e-54 | 37 | 549 | 552 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
PLN02191 | PLN02191 | 2.0e-72 | 19 | 541 | 563 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 4.0e-86 | 20 | 540 | 554 | + oxidoreductase | ||
TIGR03388 | ascorbase | 4.0e-96 | 30 | 536 | 554 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 28 | 561 | 538 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 543 | 1 | 526 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1asq_A | 0 | 28 | 543 | 1 | 526 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 1asp_B | 0 | 28 | 543 | 1 | 526 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |