Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna20759.1-v1.0-hybrid |
Family | GT14 |
Protein Properties | Length: 459 Molecular Weight: 51165.2 Isoelectric Point: 8.8278 |
Chromosome | Chromosome/Scaffold: 6 Start: 26168074 End: 26171652 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 112 | 366 | 0 |
LAYLLSGSKGDSGRILRLLYATYHPRNQYLLHLHRFAPQTERDLLALKVQSEPIFRAAQNVHLIGNADIVYPKGSSSISFTLHGASILLRLSSNWDWFIS LTVDDYPLVNQDDLLHIMSFLPKELNFVNHSSYIGWKEAKRLKPVIVDPGLYRSEPNVMFYAAQKRVLPNAYRLFTGASFNILSRSFMEFCVVGIDNLPR TLLMYFANTASSLSDYFPTVICNSRKFNKTILNHNLLYANFDTTPKEKPPRLSSN |
Full Sequence |
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Protein Sequence Length: 459 Download |
MSSPSSSTIN HHTHRPTTLQ EAMQNPDPPP PPPPSSSSSS SSSSSSFKDH LTILLLIFAS 60 SLLALLLFLT LSSSPYSSPS SSSATLPPDP FLFPTRVVYH DYNSSDPTPP SLAYLLSGSK 120 GDSGRILRLL YATYHPRNQY LLHLHRFAPQ TERDLLALKV QSEPIFRAAQ NVHLIGNADI 180 VYPKGSSSIS FTLHGASILL RLSSNWDWFI SLTVDDYPLV NQDDLLHIMS FLPKELNFVN 240 HSSYIGWKEA KRLKPVIVDP GLYRSEPNVM FYAAQKRVLP NAYRLFTGAS FNILSRSFME 300 FCVVGIDNLP RTLLMYFANT ASSLSDYFPT VICNSRKFNK TILNHNLLYA NFDTTPKEKP 360 PRLSSNDFDV MVQNGAAFAT GFRSDDPILD RIDREILNRH RGKVVPGGWC LGGFGNDTCS 420 VWGDADILRP SPRARGLEKL LVDLLSNDTF RSRQCIYK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 7.0e-54 | 112 | 372 | 265 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 9.0e-126 | 106 | 455 | 350 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.0007 | 128 | 332 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.0007 | 128 | 332 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.0007 | 128 | 332 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.0007 | 128 | 332 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.0008 | 128 | 332 | 101 | 289 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |