| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna21488.1-v1.0-hybrid |
| Family | CE8 |
| Protein Properties | Length: 534 Molecular Weight: 58818.6 Isoelectric Point: 10.1443 |
| Chromosome | Chromosome/Scaffold: 7 Start: 8739828 End: 8742669 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 233 | 451 | 0 |
| NIVVAKDGSGKYKTIGDALKAVPDKSKKRTVIYVKKGVYFENVRVEKTKWNVVVVGDGMTATIVSASLNVVDFSSATFAVFGKGFVARDIGFRNTAGAAK HQAVALMSSADQTVFYRCRIDAFQDSLYVHANRQFYRECDIYGTVDFIFGNSAVVLQNCKVFPRVPMTGQQNTITAQGKIDPNQNTGISFQNCTISPFGD LSSVKTYLGRPWKNYSTTY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 534 Download |
| MSSFKAYGKV SESDQAKLDA RRKTCKRVAI ISISSIVLVC VIVASVVGTA THNSKKGDDS 60 GKGTLSASVK AVCDVTLYQD SCYSSLGPVV NSSNFKPEDL FKWRLRNYPK PPLKFRIKGS 120 SMSLSGDGSL LEVVEDLKTW LSSAGTYQQS CVDGFDDAKG ELKDTIEKYL KTSTELTSNS 180 LAIVSWISKV ANSVKLRRLL SHDGTATSHG IPEWLHQTDR RLIESSDLRK KANIVVAKDG 240 SGKYKTIGDA LKAVPDKSKK RTVIYVKKGV YFENVRVEKT KWNVVVVGDG MTATIVSASL 300 NVVDFSSATF AVFGKGFVAR DIGFRNTAGA AKHQAVALMS SADQTVFYRC RIDAFQDSLY 360 VHANRQFYRE CDIYGTVDFI FGNSAVVLQN CKVFPRVPMT GQQNTITAQG KIDPNQNTGI 420 SFQNCTISPF GDLSSVKTYL GRPWKNYSTT YTFQGLPKKF RVEFKSIAKS GAASIVQLWI 480 EIPVFWFGSV RPCAVNAFFW FGMGFRAYKL QLWKTAAALP KMKSTVPYMS HSL* 540 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02745 | PLN02745 | 9.0e-117 | 4 | 450 | 513 | + Putative pectinesterase/pectinesterase inhibitor |
| PLN02301 | PLN02301 | 5.0e-125 | 136 | 454 | 327 | + pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 1.0e-142 | 233 | 450 | 226 | + Pectinesterase. |
| PLN02314 | PLN02314 | 2.0e-160 | 3 | 454 | 504 | + pectinesterase |
| PLN02468 | PLN02468 | 0 | 4 | 450 | 486 | + putative pectinesterase/pectinesterase inhibitor |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 233 | 454 | 8 | 237 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 232 | 454 | 3 | 233 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1qjv_B | 2e-16 | 233 | 444 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 2e-16 | 233 | 444 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 2e-16 | 233 | 444 | 5 | 245 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
