Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna21640.1-v1.0-hybrid |
Family | GH28 |
Protein Properties | Length: 978 Molecular Weight: 109607 Isoelectric Point: 7.0134 |
Chromosome | Chromosome/Scaffold: 3 Start: 3524561 End: 3530339 |
Description | threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH28 | 746 | 962 | 0 |
LFHINVINSKHLTLQRITIDAPQESLNTDGIHIGRSSYINVTDANIKTGDDCVSLGDGSQNINVEKVTCGSGHGISIGSLGRYHDEQPVQGVTVRYCQIS NTTNGVRIKTWPASPNGVASDLHFEDISMDNVKTNPVLVDQEYCPYGQCQAKLPSKVKISNVSFKNIRGTTQDLVAVKLVCSRGIPCQNVQVADINLTYN GNKNGTAISECANVKPT |
Full Sequence |
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Protein Sequence Length: 978 Download |
MATTSSSLLS SPLLKPSSFL SPLKRCVSQP TSDFRAFAFS RNGLSTSAAA VAATEPHVST 60 QHDKLKEAQK DKSDKLDRVV LPSNESSEKL LRIRHTCAHV MAMAVQKLYP DAKVTIGPWI 120 ENGFYYDFDM EPLTDKELKR IKKEMDRIIC RNLPLVREEV SREEAQRRIS TLNEPYKLEI 180 LDSIKDDPIT IYHIGNEWWD LCAGPHVEYT GKINRKAVEL ESIAGAYWRG DEKKPMLQRI 240 YGTAWENEEQ LQAYLHFKEE AKRRDHRRLG QVLDLFSIQF EFLQNDAGGG LVFWHPKGAI 300 VRHVIEDLWK KTHIERGYDL LYTPHVAKAD LWQISGHLDF YRENMYNQMD VEDELYQLRP 360 MNCPYHILIY KRRRHSYNDF PIRVAELGTV YRYELSGSLH GLFRVRGFTQ DDAHIFCLED 420 QIKDEIRGVL DLTEELLLKF GFSKYEVNLS TRPEKSVGDD DIWEKATSAL RDALEDKGWS 480 YQIDDGGGAF YGPKIDLKIE DALGRKWQCS TIQASPEQKK RPIMIHRAVL GSLERFFGVL 540 IEHYAGDFPL WLSPVQAHVL PVTDTQLDYC KELTNKLKVS GIRGELCHGE RLPKLIRNSE 600 MLKIPLMAVV GAKEVESGTV TVRSRSGDDP GTMSIDDFVT FSLTANAADF DVRKYGAKAD 660 GKTDDSQAIN KAWTDACTAT SQSTVVIEKR NYLVGPVRFG GPCKAPISIK VAGTLVAPAE 720 PEKLKSQDGW VVFQNVDNLS VFGGKLFHIN VINSKHLTLQ RITIDAPQES LNTDGIHIGR 780 SSYINVTDAN IKTGDDCVSL GDGSQNINVE KVTCGSGHGI SIGSLGRYHD EQPVQGVTVR 840 YCQISNTTNG VRIKTWPASP NGVASDLHFE DISMDNVKTN PVLVDQEYCP YGQCQAKLPS 900 KVKISNVSFK NIRGTTQDLV AVKLVCSRGI PCQNVQVADI NLTYNGNKNG TAISECANVK 960 PTVSGFNHPQ VCAKNVA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02837 | PLN02837 | 0 | 48 | 640 | 607 | + threonine-tRNA ligase | ||
PRK12305 | thrS | 0 | 85 | 647 | 580 | + threonyl-tRNA synthetase; Reviewed | ||
PRK00413 | thrS | 0 | 70 | 639 | 590 | + threonyl-tRNA synthetase; Reviewed | ||
COG0441 | ThrS | 0 | 74 | 639 | 582 | + Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | ||
TIGR00418 | thrS | 0 | 94 | 639 | 564 | + threonyl-tRNA synthetase. This model represents the threonyl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. Note that B. subtilis has closely related isozymes thrS and thrZ. The N-terminal regions are quite dissimilar between archaeal and eubacterial forms, while some eukaryotic forms are missing sequence there altogether. [Protein synthesis, tRNA aminoacylation]. |
Gene Ontology | |
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GO Term | Description |
GO:0000166 | nucleotide binding |
GO:0004650 | polygalacturonase activity |
GO:0004812 | aminoacyl-tRNA ligase activity |
GO:0005524 | ATP binding |
GO:0005737 | cytoplasm |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1qf6_A | 0 | 88 | 639 | 66 | 625 | A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna |
PDB | 1nyr_B | 0 | 79 | 639 | 61 | 632 | A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna |
PDB | 1nyr_A | 0 | 79 | 639 | 61 | 632 | A Chain A, Structure Of E. Coli Threonyl-Trna Synthetase Complexed With Its Cognate Trna |
PDB | 1nyq_B | 0 | 79 | 639 | 61 | 632 | A Chain A, Structure Of Staphylococcus Aureus Threonyl-trna Synthetase Complexed With An Analogue Of Threonyl Adenylate |
PDB | 1nyq_A | 0 | 79 | 639 | 61 | 632 | A Chain A, Structure Of Staphylococcus Aureus Threonyl-trna Synthetase Complexed With An Analogue Of Threonyl Adenylate |
Sequence Alignments (This image is cropped. Click for full image.) |
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