Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna21868.1-v1.0-hybrid |
Family | GH35 |
Protein Properties | Length: 851 Molecular Weight: 94504.5 Isoelectric Point: 8.1475 |
Chromosome | Chromosome/Scaffold: 2 Start: 9240677 End: 9246913 |
Description | beta-galactosidase 3 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 35 | 338 | 0 |
LVINGQRKILFSGSIHYPRSTPEMWEGLIEKAKDGGLDVIDTYVFWNLHEPSPGNYNFEGRNDLVRFIKMVQEARLYVHLRIGPYICSEWNFGGFPVWLK YVPGISFRTDNEPFKSAMQKFTKKIVQLMKHEKLFESQGGPIILSQIENEYEPESKLFGAAGHAYMTWAAEMAVGMGTGVPWVMCKEEDAPDPVINTCNG FYCDYFSPNKPYKPSLWTEAWTGWFTEFGGPIYKRPVEDLAFGVARFIQNGGSFINYYMYHGGTNFGRTAGGPFITTSYDYDAPIDEYGLIRQPKHGHLK ELHK |
Full Sequence |
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Protein Sequence Length: 851 Download |
MGASSALSWV LLCIVLLCLC FQLIQSNVSY DRKALVINGQ RKILFSGSIH YPRSTPEMWE 60 GLIEKAKDGG LDVIDTYVFW NLHEPSPGNY NFEGRNDLVR FIKMVQEARL YVHLRIGPYI 120 CSEWNFGGFP VWLKYVPGIS FRTDNEPFKS AMQKFTKKIV QLMKHEKLFE SQGGPIILSQ 180 IENEYEPESK LFGAAGHAYM TWAAEMAVGM GTGVPWVMCK EEDAPDPVIN TCNGFYCDYF 240 SPNKPYKPSL WTEAWTGWFT EFGGPIYKRP VEDLAFGVAR FIQNGGSFIN YYMYHGGTNF 300 GRTAGGPFIT TSYDYDAPID EYGLIRQPKH GHLKELHKAV KLCEQALLNA DSIVTSLGNY 360 EQIQFQAHIF SSKSGGCAAF LSNYNTKSAA RVTFNKMNYH LPPWSISILP DCKNVVYNTA 420 QVGVQTSQKQ FFPTNSKLRL WETFSEDISS VASDTKLTVI GLLDQLNITR DSSDYLWYTT 480 NIDIKSSESF LRGGQHPTLT VQSSGDAMHV FINGQLSGSS YGTRKNKRFT FTGNVSLHAG 540 MNKISLLSIA VGLPLSKNNG PHFETRNAGV LGPVALHGLD QGSRDLSWQK WSHKVGLIGE 600 AMNLGSPSSI SAVDWTRVNL AAKNQQPLTW YKVNFDAPEG DEPLALDMGS MGKGQLWING 660 QSIGRYWTTY ANGDCSACSY AGTFRPKNKC QSGCNRPTQQ WYHVPRSWLK QSKNLLVVFE 720 EISGDVSKIA LVKTSVSTVC AEVFENHPYI RNWHTDSGGQ LEEQKKPIMS LHCTEGYSIS 780 AIKFSSFGTP SGSCGNFQHG TCHAPNSKAV IEKKCIGKQK CSLTISDANF GMDPCPSILK 840 KLSVEAVCAP * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 2.0e-5 | 50 | 185 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 7.0e-23 | 771 | 848 | 81 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 7.0e-25 | 28 | 329 | 359 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 1.0e-165 | 34 | 340 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 849 | 825 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 23 | 336 | 3 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-37 | 28 | 323 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-37 | 28 | 323 | 11 | 318 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |