Basic Information | |
---|---|
Species | Fragaria vesca |
Cazyme ID | mrna22463.1-v1.0-hybrid |
Family | GH3 |
Protein Properties | Length: 619 Molecular Weight: 67992.6 Isoelectric Point: 6.0214 |
Chromosome | Chromosome/Scaffold: 4 Start: 11983187 End: 11986727 |
Description | Glycosyl hydrolase family protein |
View CDS |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH3 | 88 | 323 | 0 |
LETRLRIPLIYGIDAVHGNNSVYGATIFPHNVGLGATRDADLARRIGEATALEVRASGIHYTFAPCVAVCRDPRWGRCYESYSEDTEIVRKMTSIISGLQ GKAPQGHENGFPFIKGRNNTIACAKHFVGDGGTQKGVNEGNTISSYYDLERIHMAPYLDCISQGVSTIMASYSSWNGNRLHADRFLLTEILKGKLGFKGI VISDWDGHETISEPQGSNYRFSVLSAINAGIDMVMV |
Full Sequence |
---|
Protein Sequence Length: 619 Download |
METVEELNCI YRNPNESIEA RVKDLLSRMT LKEKVGQMTQ IEREVATPFA IKDLSIGSII 60 SGAGSEPFKK ALSADWADMV DGFQRCALET RLRIPLIYGI DAVHGNNSVY GATIFPHNVG 120 LGATRDADLA RRIGEATALE VRASGIHYTF APCVAVCRDP RWGRCYESYS EDTEIVRKMT 180 SIISGLQGKA PQGHENGFPF IKGRNNTIAC AKHFVGDGGT QKGVNEGNTI SSYYDLERIH 240 MAPYLDCISQ GVSTIMASYS SWNGNRLHAD RFLLTEILKG KLGFKGIVIS DWDGHETISE 300 PQGSNYRFSV LSAINAGIDM VMVPFRFKNF VDDLVNLVEH GEIPMSRIDD AVERILRVKF 360 VAGLFEHPFS DRSLLDKVGC KLHRDLAREA VRKSLVLLKN GKEPRKPFLP LDRKAKRILV 420 TGTHADDLGY QCGGWTVTKA GLSGRFTIGT TILEAIKKAV GHKTEIIHEQ LPSTDTLARN 480 DISFAIVAIG EGSYAECKGD NSELVIPFDG DDIITSVAER IPTLVILISG RPLTVQPSLL 540 DKMDALVSAW LPGSEGEGIA DVIFGDYNFE GKLPVTWFKS VEQLPLDAGS NSYEPLYPLG 600 FGLTCNTEKI IHQTGFDE* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 3.0e-40 | 13 | 587 | 615 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 8.0e-54 | 395 | 604 | 230 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 1.0e-81 | 30 | 358 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 9.0e-85 | 19 | 604 | 654 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-91 | 29 | 460 | 445 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 10 | 609 | 4 | 603 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1iex_A | 0 | 10 | 609 | 4 | 603 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1iew_A | 0 | 10 | 609 | 4 | 603 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1iev_A | 0 | 10 | 609 | 4 | 603 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 1ieq_A | 0 | 10 | 609 | 4 | 603 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Sequence Alignments (This image is cropped. Click for full image.) |
---|