| Basic Information | |
|---|---|
| Species | Fragaria vesca |
| Cazyme ID | mrna22540.1-v1.0-hybrid |
| Family | GH2 |
| Protein Properties | Length: 977 Molecular Weight: 111348 Isoelectric Point: 6.8147 |
| Chromosome | Chromosome/Scaffold: 6 Start: 2525989 End: 2531079 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH2 | 43 | 738 | 0 |
| WVEAVVPGTVLATLVKSKELPDPFYGLENESIIDIADSGRQWYTFWYFTTFQCKLLGTQHLDLNFRGINYYAEVYLNGHKKDVPRGMFRRHSLDVTDIVR NGENLLAVVVYPPDHPGSIPPEGGQGGDHEIGKDVATQYVEGWDWMCPIRDRNTGIWDEVSIYVTGPVKIIDPHLVSTFYDNYKRAYLHATTELENRSTS VAECSLNIQVTTELEGNICLVEHLQTQHLSIPAGSRVQYTFPESIMWQLFFYKPNLWWPNGMGKQSLYNVVITVDVKGYGESDLYSQLFGFRKIESHIDN ATGGRLFKVNGQPIFIRGGNWILSDGLLRLSEKRYKTDIKFHSDMNFNMIRCWGGGLAERPEFYYYCDIYGLLVWQEFWITGDVDGRGVPVSNPNGPLDH DLFMLCARDTVKLLRNHPSLALWVGGNEQVPPDDINKALKQDLRLHPHFEKSINGSGISENLKSVDPSQYLDGTRIYIKGSMWDGFANGKGDFTDGPYEI QNPEDFFKDDFYKYGFNPEVGSVGMPVAATIRATMPPEGWQIPLFKKASNDYEEAPNPIWEYHKYIPYSKPGKVRDQISLYGFPKDLDDFCLQAQLANYI QYRALLEGWTSRMWSKYTGVLIWKTQNPWTGLRGQFYDHLLDQTAGFYGCRCAAEPLHVQLNLATYFIEVVNTTSEELSDVAIEVSVWDLDGACPY | |||
| Full Sequence |
|---|
| Protein Sequence Length: 977 Download |
| MATAIGKTKL HSGWLGTRDR DVTVTGVQLT TTHPPSLGPT SPWVEAVVPG TVLATLVKSK 60 ELPDPFYGLE NESIIDIADS GRQWYTFWYF TTFQCKLLGT QHLDLNFRGI NYYAEVYLNG 120 HKKDVPRGMF RRHSLDVTDI VRNGENLLAV VVYPPDHPGS IPPEGGQGGD HEIGKDVATQ 180 YVEGWDWMCP IRDRNTGIWD EVSIYVTGPV KIIDPHLVST FYDNYKRAYL HATTELENRS 240 TSVAECSLNI QVTTELEGNI CLVEHLQTQH LSIPAGSRVQ YTFPESIMWQ LFFYKPNLWW 300 PNGMGKQSLY NVVITVDVKG YGESDLYSQL FGFRKIESHI DNATGGRLFK VNGQPIFIRG 360 GNWILSDGLL RLSEKRYKTD IKFHSDMNFN MIRCWGGGLA ERPEFYYYCD IYGLLVWQEF 420 WITGDVDGRG VPVSNPNGPL DHDLFMLCAR DTVKLLRNHP SLALWVGGNE QVPPDDINKA 480 LKQDLRLHPH FEKSINGSGI SENLKSVDPS QYLDGTRIYI KGSMWDGFAN GKGDFTDGPY 540 EIQNPEDFFK DDFYKYGFNP EVGSVGMPVA ATIRATMPPE GWQIPLFKKA SNDYEEAPNP 600 IWEYHKYIPY SKPGKVRDQI SLYGFPKDLD DFCLQAQLAN YIQYRALLEG WTSRMWSKYT 660 GVLIWKTQNP WTGLRGQFYD HLLDQTAGFY GCRCAAEPLH VQLNLATYFI EVVNTTSEEL 720 SDVAIEVSVW DLDGACPYYK VHENLSMLPK RTVPITEMKY PKSRNPKPVY FLLLKLYHKS 780 NFRIISRNFY WLHLSGGDYK LLEPYRKKRV PLKILSEVFI KGTTYEMHMK VKNTSAKPQP 840 KTLTYQNHFT PKLGDGDFDV HSVEPKPDGA DEKHGVGFLQ NIYRHFTKET DGLRVAEING 900 SDVGVAFFLH FSVHGVKKDH KEGEDTRILP VHYTDNYFSL VPGESMPVKI TFEVPPGVTP 960 RVSLQGWNYH GAHRVR* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK10150 | PRK10150 | 1.0e-8 | 87 | 470 | 417 | + beta-D-glucuronidase; Provisional | ||
| PRK09525 | lacZ | 2.0e-9 | 136 | 470 | 360 | + beta-D-galactosidase; Reviewed | ||
| pfam00703 | Glyco_hydro_2 | 4.0e-11 | 210 | 334 | 125 | + Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK10340 | ebgA | 1.0e-22 | 105 | 470 | 381 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 1.0e-41 | 44 | 690 | 678 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vzo_B | 0 | 39 | 792 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzo_A | 0 | 39 | 792 | 77 | 767 | A Chain A, Crystal Structure Of Amycolatopsis Orientalis Exo- Chitosanase Csxa |
| PDB | 2vzu_B | 0 | 39 | 792 | 77 | 767 | A Chain A, Complex Of Amycolatopsis Orientalis Exo-Chitosanase Csxa D469a With Pnp-Beta-D-Glucosamine |
| Hydropathy |
|---|
 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
| Phylogeny |
|---|
 |