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Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna22553.1-v1.0-hybrid |
Family | GT8 |
Protein Properties | Length: 686 Molecular Weight: 78605.7 Isoelectric Point: 8.789 |
Chromosome | Chromosome/Scaffold: 6 Start: 2594939 End: 2597604 |
Description | plant glycogenin-like starch initiation protein 5 |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 402 | 606 | 4.5e-38 |
RYAYVTILHSSEAYVCGAIALAQSIRRTNSTKDLILLADNSITPTSIAGLQAAGWDVRQIQRIRSVFSLKGSYNEWNYSKLRVWQLTEYSKVIFIDADLL VLENIDIFFTYPQLSAGLNHQHFFNSGLMIVEPSQCMFEYLMRKSFKIKPYNGGDQGFLNEIFTWWHRLPWWLNALKTFEGKSIEKHVMAQDLYAVHYLG LKPWM |
Full Sequence |
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Protein Sequence Length: 686 Download |
MTIQCGDAQM ASKLSSPSSS KPFYLYAFIF SLFLVLLVSS FRLNVINSVV VQHQQQQEQQ 60 FKNQTDNAVN VLKAVAKKLG RKKMRVGLVN VDHDRIRLMQ GSEDIDPIPV SFDRVGGDRK 120 WEDFFPEWID EDERWEHPKC PEIPMPRFED YNGIDVILAK VPCGTSGDEK QGIRDVFRLQ 180 VNLVLANMAA RLGWRDPDFG APHRTVYVVF IGSCDPMVEI FRCDDLVMRQ GDSRVYKPEL 240 GRLKQKVLMP FGTCQLASGY ARAGADVHTG LKVRTSVRSP PSGAGDGVPP PPEDSSSVPD 300 HFLPRRAFPI FRRDHQKLQT KSSSPETKKK WTRRGGKVVG DAAGVFWGEG APSPAPEDGE 360 RTDIGTLSRV RTSASDPLYI YKILHYNQGK EAWRPENFEY RRYAYVTILH SSEAYVCGAI 420 ALAQSIRRTN STKDLILLAD NSITPTSIAG LQAAGWDVRQ IQRIRSVFSL KGSYNEWNYS 480 KLRVWQLTEY SKVIFIDADL LVLENIDIFF TYPQLSAGLN HQHFFNSGLM IVEPSQCMFE 540 YLMRKSFKIK PYNGGDQGFL NEIFTWWHRL PWWLNALKTF EGKSIEKHVM AQDLYAVHYL 600 GLKPWMCYRD YDCNWDVESR RVFACDSAHR RWWQVYDAMP QELQPFCGLT EKMDKSLKTW 660 RARAANASYV DGHWKIEIKD PRQHH* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5597 | COG5597 | 3.0e-9 | 399 | 513 | 138 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
cd06914 | GT8_GNT1 | 6.0e-13 | 403 | 544 | 155 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
PLN00176 | PLN00176 | 5.0e-17 | 400 | 637 | 284 | + galactinol synthase | ||
pfam01501 | Glyco_transf_8 | 2.0e-30 | 406 | 605 | 246 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 1.0e-72 | 403 | 639 | 247 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 3e-19 | 404 | 605 | 6 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3u2x_A | 3e-19 | 404 | 605 | 6 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3u2v_B | 3e-19 | 404 | 605 | 6 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3u2v_A | 3e-19 | 404 | 605 | 6 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 3u2u_B | 3e-19 | 404 | 605 | 6 | 221 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |